Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0402 |
Symbol | |
ID | 6202771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 500323 |
End bp | 502929 |
Gene Length | 2607 bp |
Protein Length | 868 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641701936 |
Product | bifunctional aspartate kinase/diaminopimelate decarboxylase protein |
Protein accession | YP_001829124 |
Protein GI | 182680964 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase [COG0527] Aspartokinases |
TIGRFAM ID | [TIGR00657] aspartate kinase [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCTT CCCCTACAGC CGAGCGCTGG ATCGTTCTAA AATTTGGTGG TACTTCCGTA TCGCGTCGTC ATCGCTGGGA CACCATTGCG ATGGTGGTGA GGAAGCGCCT TGAAGAGCAT GGAACACGTG TACTGATCGT GGTTTCGGCG CTGTCTGGCG TGACCAATGA ACTGACGGCG ATTGCTCAAG GTGTTGTGGA CAGTGCCAAG CGCGTCACTG CATTGGAGCA GCGTCATCGC GATTTTTTGG TTGAGCTTGG GTTAGATGCG CAAGCTGTGC TCGGCACGCG TTTCGCCATG TTGTCGGATC TTCTGCAAGA TGCGCGTGCG GTGACGCGGT CACTGGACTG GCAGGCTGAG TTGTTAGGGC AAGGTGAACT GTTGTCTTCC ACACTCGGTG CGGCCTACCT GGGTGCTTCG GGTATTGATA TCGGTTGGAT GGATGCACGT GACTGGCTGA CCGCTTTACC ACCACAGCCC AACCAGAGTG AATGGTCGCA ACGTCTTTCT GTCTCCTGTC AATGGAAGTC TGATGTGGAG TGGCGTACAC GTTTCGATGC CCAACGTGCT CAGGTATTGA TCACTCAAGG GTTTATCTCA CGTCATCAAG ATGGTGGTAC CGCCATCCTG GGACGTGGTG GTTCGGACAC GTCAGCAGCA TATTTTGGTG CGCTACTTGG TGCGGCGTGT GTTGAGATCT GGACTGATGT ACCAGGGATG TTCAGTGCGA ACCCGAAGGA GGTCCCTGAT GCGCGTTTGC TGACGCGCCT GGATTACTAC GAGGCACAGG AGATCGCCAC AACTGGCGCG AAGGTGTTGC ATCCGCGTTC GATCAAACCA TGCCGTGATA CTGGCGTGCC GATGCTGATT CTAGATACTG AGCGGCCCGA TGTGTTGGGG ACCCGTATTG ATGCTGAAGT TGAGCCGGTG CTTGGAGTCA AGGCGATTAG CCGTCGTGAT GGCATTGTAT TAGTGTCGAT GGAAGGGATC GGCATGTGGC AGCAGGTGGG TTTTCTTGCT GACGTATTTA CATTGTTCAA GAAACACGGA TTGTCGGTGG ACCTCATCGG ATCGGCAGAA ACCAATGTTA CTGTGTCCTT GGACCCCTCC GAGAACCTGG TTAACACCGA CGTACTGACT GCATTGTCAA CCGATTTATC ACAGATCTGC AAAGTCAAAA TTATTGTGCC TTGCGCTGCG ATCACTTTGG TCGGGCGTGG TATGCGTTCC CTGCTGCATA AACTCTCTGA GGTATGGGCT ACGTTCGGTA AAGAACGTGT CCACATGATC TCGCAGTCTT CCAATGATCT TAATCTCACC TTTGTGATTG ATGAGACTGA TGCGGACGGA TTATTGGCGG TGCTGCATTT CAAATTGATC GAAAGTGGTG CAATGCCTGT CCAAGATCGT GCCGTGTTTG GTTCGCCTTG GCGCGAGATC ATCGGGCACG TACGTACGCG GGTCATGCCT TGGTGGCACA GTGCCCGCAT GCGTTTACTG GCCATGAGAG ATGAAGAGGG CATTGGTCCT TGCTACGTCT ACCATTTGCC GACAGTGCGC GAACGTGCGC GGCAATTGAA TGCAGTAGCT GCCGTGGATC AGTGCTACTA CGCCATCAAG GCCAACCCGC ATCCGGCCAT TCTCCGTACC CTGATTGAAG AAGGCTTTGG ACTAGAGTGC GTGTCATTGG GTGAATTGCG TCACGTGTTT GAAGTGGTGC CACACTTGGT TCCGTCGCGT GTGTTATTCA CTCCAAGTTT CGCCTCACGT GTGGAGTACG AGCAGGCATT CTTACTAGGT GTCAATGTGA CCTTGGACAA TGTCGAGGCC TTGCGCTTAT GGCCGGAGGT ATTCCGTGAA CGGACGTTAT GGTTACGTAT CGATTTGGGT TACGGCGATG GACATCACGA GAAGGTCACC ACCGGTGGTA AGACATCTAA ATTTGGCCTT TCGGTCACGC GGATTGATGA ATTTATCGAT GTTGCCAAGA CACTGAACAT AACCGTGACC GGCCTGCATG CCCATCTTGG CAGTGGCGTG GAGAGCGGCA ACCATTGGTC TCGCATGTAC GATGAGTTGG CTGGTTTTGC CTCCCGCATC GGGAGTGTGT CTACCCTGGA TATCGGCGGC GGCTTACCGA TCCCGTACCG GCCTGATGAT GAACCATTTG ACGTGGGGGC GTGGGGAGCA AGTTTGGCTG AAGTCAAAGC CTTGCATCCC AAATTTCAAT TGGTGATTGA GCCGGGCCGC TTCCTTGTAG CCGAAGCGGG CGTGCTCTTG ACCAGGGTCA CCCAAGTGAT TGAAAAAGAT GACATCCTTC GGGTTGGCCT GGAGGCTGGC ATGCATACCC TGATTCGTCC GGCCCTTTAC GATGCCTGGC ACGGCGTGGA GAACCTCACC CGCTTGGATG AGACACCCCA TGTACTGTGC GATGTCGTGG GTCCTATTTG CGAGTCATCC GACGTGTTTG GCCGTCGCCG TCACCTTCCA GCCGCCACCG CCTCCGGTGA TTTAATGTTG ATTGCAGATG CTGGCGCCTA TGGTTTCTCG ATGGCCAGCA CTTACAATCT GCGCGGCCTG CCGGCCGAGG TCGTGCTTGA TGCCTGA
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Protein sequence | MSASPTAERW IVLKFGGTSV SRRHRWDTIA MVVRKRLEEH GTRVLIVVSA LSGVTNELTA IAQGVVDSAK RVTALEQRHR DFLVELGLDA QAVLGTRFAM LSDLLQDARA VTRSLDWQAE LLGQGELLSS TLGAAYLGAS GIDIGWMDAR DWLTALPPQP NQSEWSQRLS VSCQWKSDVE WRTRFDAQRA QVLITQGFIS RHQDGGTAIL GRGGSDTSAA YFGALLGAAC VEIWTDVPGM FSANPKEVPD ARLLTRLDYY EAQEIATTGA KVLHPRSIKP CRDTGVPMLI LDTERPDVLG TRIDAEVEPV LGVKAISRRD GIVLVSMEGI GMWQQVGFLA DVFTLFKKHG LSVDLIGSAE TNVTVSLDPS ENLVNTDVLT ALSTDLSQIC KVKIIVPCAA ITLVGRGMRS LLHKLSEVWA TFGKERVHMI SQSSNDLNLT FVIDETDADG LLAVLHFKLI ESGAMPVQDR AVFGSPWREI IGHVRTRVMP WWHSARMRLL AMRDEEGIGP CYVYHLPTVR ERARQLNAVA AVDQCYYAIK ANPHPAILRT LIEEGFGLEC VSLGELRHVF EVVPHLVPSR VLFTPSFASR VEYEQAFLLG VNVTLDNVEA LRLWPEVFRE RTLWLRIDLG YGDGHHEKVT TGGKTSKFGL SVTRIDEFID VAKTLNITVT GLHAHLGSGV ESGNHWSRMY DELAGFASRI GSVSTLDIGG GLPIPYRPDD EPFDVGAWGA SLAEVKALHP KFQLVIEPGR FLVAEAGVLL TRVTQVIEKD DILRVGLEAG MHTLIRPALY DAWHGVENLT RLDETPHVLC DVVGPICESS DVFGRRRHLP AATASGDLML IADAGAYGFS MASTYNLRGL PAEVVLDA
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