Gene XfasM23_0187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_0187 
Symbol 
ID6203577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp253963 
End bp257046 
Gene Length3084 bp 
Protein Length1027 aa 
Translation table11 
GC content54% 
IMG OID641701725 
Productacriflavin resistance protein 
Protein accessionYP_001828918 
Protein GI182680758 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTA CGCACGTAGC AATGAGTGCC AACCGGCTGA CTCTATTCAC CGCAGTGTTG 
CTACTGATCG CCGGTATCGC CACCTTTCTC AACTTCCCCT CGCAAGAGGA ACCTTCGGTC
ACGGTACGCG ATACGCTGAT ATCAGTGGCG TATCCAGGGA TGCCTAGTGA GCAAGTCGAA
ACGTTATTAG CAAAACCTAT CGAGGAACGG CTACGGGAGA TTGTCGGTAT TAAGAAAATT
GTCAGCACCG TACGGCCAGG GAGTGTGCTC ATCCAGTTGA CCGCCTATGA CAATGTCAAA
AATTTGGAGA CGTTGTGGCT GCGCGTCCGA GCCAAAGTCG CTGAAGCCGG TACAGGGTTA
CCCACCGGCA CGCTGGGTCC GTTTCTCAAT GACGACTTTG GCCGCGTGGC AGTCGCTTCC
ATCGCAATCA CGGCACCTGG CTTCAGCATG AGCGAAATGC GTGAGCCATT ACGCCGAATG
CGCGAACAGT TGTATACGGT GCCTGGTGTG GAACGCGTCA CGCTGCACGG TCTACAGGAG
GATCAGGTTT ACGTTGCGTT TGACCGCGCC AGACTGGTCG AGGCCGGGTT AACTCCGGCA
GCAGTGATCC AGCAATTGCA AGCACAAAAT GTCGTTGCAC CTGGAGGACT CGTCTCCGCG
TCCGGGATGG CGCTAACTGT CGCTACCAGC GGTGAAGTGG GTAGTGTCGA TGAGTTGCGC
CGCTTTTTGG TGTCGGTACC TGGTTCTTCC AGTACACGCG AAGTGCCATT AAGTCAGATC
GCGCAAGTAC AGGTGATGCC TGCGGATCCA CCGCAAACGG CAGCGGTGTA TCAGGGACAA
TCGGCCGTAG TGTTGGCAGT ATCAATGACC AGAGGACGCA ATATTTCAGA GTTCGGCAAC
ACACTACGTG CTGCACTTGA AGAAACCAGT CAACTGCTAC CGATAGGGTT CCAACAGCAC
GTGGTGACCT TCCAAGCCGA TGTGGTCGAC CGTGAAATGG GCAAGATGCA TCGTGTCATG
GGCGAAACGG TGCTCATCGT GATGGCTGTG GTGATGTTGT TCTTGGGGTG GCGCACTGGT
CTGATTGTTG GAGCCATCGT GCCGCTGACT GTTCTCAGTG CGCTGATCAT CATGCGCGCA
ATCAATATCG AACTGCATAC CGTCTCGATT GCTGCAATCA TTATGGCCCT GGGTCTGTTG
GTGGATAACG CGATTGTCAT CGCTGAGGAC ATTGAGCGCC GTCTTGCCAT TGGCGAGGAT
CGACGCCATG CCTGCATCGA AGCAGGACGC ACGCTGTCTA TCCCATTGTT GACATCATCG
CTAGTGATTG TGCTGGCTTT TTCTCCTTTC TTCTTTGGTG AAACTGCAAC AAATGAGTAC
TTGCGTCCGC TAGTCATCGT GTTAGCGATT ACTTTGCTCA GTTCCTGGTT GCTTAGCATC
ACCATCATTC CATTGCTGTG CTTGTACTTC GCCAAGGCGC ATCGTGCGCC CACCGAGGAT
CAAGGACATA ATCTTTACGA TTCGGCGTTT TATCGTAGTT ACCGGGCAAT CATCAGCCGC
GTGCTGGAGC ACAAGGTGCT GTTCATCGGT AGCATGCTGG CATTGCTCGC CGTGGCCGTC
ATCGTCATCA CCTTGATTCC GTATAGCTTC CTGCCTAAAT CCGATCGTTT GCAATTCCAA
ATGCCCATCA CGCTGCAACC CGGCAGCGAT TCACGGCAAA CGCTCGACAC CGTCCAACAA
ATAAGCCGTT GGTTCGCTGA AAAACAGATT AATCCGGAGG TGGTAGACAG CATCGGTTAC
GTCGCCGACG GTGGCCCGCG TATTGTGCTT GGTCTGAATC CACCGCTGCC GGCACCCAAT
GTTGCCTACT TCACCATCAG TGTGCATCCA GGCACTGACA TTGATGCAGT GATCGCACGC
ACCCGCAAGC ACATGCACAA TGCGTTCCCA TATGTGCGTG CTGAACCCAA ACGATTTTCG
TTGGGAGCAA ACGAAGCGGG CGTTGTGATC TACCGCATCG TCGGACCGGA TGAAGCCGTG
CTGCGTCAAT CTGCTAAGCA AATCAGCGAG GCTCTAAGCG CGTTGCCAGG CACGTATGAC
ATTTATAACG ATTGGCAGGC ACGTGTACCA CGTTATATCG TGCATGTGGA TCAGTTGAAG
GCACGCCGTG CCGGGATCAG CAGTGAAGAG ATTGCTCAGG CTCTACAAAT GCGCTACAGC
GGTGTGAACG CTTCGCTGAT CCGCGATGAT GGGGTTGCCG CACCGATCGT ATTGCGTGGC
AATGCAATGG AGCGCACCGC GCAGGGGAAT CCAGGCGACA CGCTGGTGTA CTCTCAAACA
CAGGGCACGC CGCTGCCGTT ATCAGCAATC GCAAAAATAG AGAATGATAC TGAACCCTCT
ACGCTGATGC GCCGCAATCT CAACCGCACG ATCACGATTA TCGGACATAA CGCGGGAATG
ACCGCAGGCG AAATTGTGCA GGCACTGGCA CCCAAGGTTG CCTCACTCAA GCTTCCGCCT
GGTTATCGTA TTGAGCTTGG TGGCGAGATC GAAGATGCCG CACAAGCCAA TCAAGCATTG
TTGCAGTTCA TGCCGCATGC ATTAGTGGCA ATCCTGCTGC TGTTTATCTT GCAATTCAAT
TCGTTCCGTA AATTATTCAT CGTCGTAGCC AGCATTCCAT TTGTGCTGAT CGGTGCAGCG
ACAGCACTGC TGATCACCGC GCATCCTTTT GGCTTTATCG CCACCTTCGG GCTGCTCGCG
TTAGCCGGCA TCATTGTCAA TAACGCTGTA TTGTTATTGG AACGCATTGA AGTCGAACTC
GCCGATGGCT TACCGCGTCG GGAAGCCGTG GTGTCTGCAG CGGTCAAACG TCTGCGACCC
ATTGTGATGA CCAAGCTGAC CTGCATTGTT GGTTTGGTAC CACTGATGTT GTTCGGTGGT
CCTCTATGGA CTGGGATGGC GATCACTATG ATCGGTGGTT TGGCACTAGG TACGCTGGTG
ACTTTGGGGT TGATCCCAAG TCTGTATGAC ATGCTCTTCG GTTTAAGCTT TAGAAAAAGA
AACGTTGTGG AAACATCGGG GTGA
 
Protein sequence
MKITHVAMSA NRLTLFTAVL LLIAGIATFL NFPSQEEPSV TVRDTLISVA YPGMPSEQVE 
TLLAKPIEER LREIVGIKKI VSTVRPGSVL IQLTAYDNVK NLETLWLRVR AKVAEAGTGL
PTGTLGPFLN DDFGRVAVAS IAITAPGFSM SEMREPLRRM REQLYTVPGV ERVTLHGLQE
DQVYVAFDRA RLVEAGLTPA AVIQQLQAQN VVAPGGLVSA SGMALTVATS GEVGSVDELR
RFLVSVPGSS STREVPLSQI AQVQVMPADP PQTAAVYQGQ SAVVLAVSMT RGRNISEFGN
TLRAALEETS QLLPIGFQQH VVTFQADVVD REMGKMHRVM GETVLIVMAV VMLFLGWRTG
LIVGAIVPLT VLSALIIMRA INIELHTVSI AAIIMALGLL VDNAIVIAED IERRLAIGED
RRHACIEAGR TLSIPLLTSS LVIVLAFSPF FFGETATNEY LRPLVIVLAI TLLSSWLLSI
TIIPLLCLYF AKAHRAPTED QGHNLYDSAF YRSYRAIISR VLEHKVLFIG SMLALLAVAV
IVITLIPYSF LPKSDRLQFQ MPITLQPGSD SRQTLDTVQQ ISRWFAEKQI NPEVVDSIGY
VADGGPRIVL GLNPPLPAPN VAYFTISVHP GTDIDAVIAR TRKHMHNAFP YVRAEPKRFS
LGANEAGVVI YRIVGPDEAV LRQSAKQISE ALSALPGTYD IYNDWQARVP RYIVHVDQLK
ARRAGISSEE IAQALQMRYS GVNASLIRDD GVAAPIVLRG NAMERTAQGN PGDTLVYSQT
QGTPLPLSAI AKIENDTEPS TLMRRNLNRT ITIIGHNAGM TAGEIVQALA PKVASLKLPP
GYRIELGGEI EDAAQANQAL LQFMPHALVA ILLLFILQFN SFRKLFIVVA SIPFVLIGAA
TALLITAHPF GFIATFGLLA LAGIIVNNAV LLLERIEVEL ADGLPRREAV VSAAVKRLRP
IVMTKLTCIV GLVPLMLFGG PLWTGMAITM IGGLALGTLV TLGLIPSLYD MLFGLSFRKR
NVVETSG