| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4610 |
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| Symbol | |
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| ID | 6205558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 5918749 |
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| End bp | 5920914 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641694278 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001821481 |
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| Protein GI | 182416415 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACCT TCCGACAGAT CCTGTTTTCG CTGCTCCTCG GCGCCGCTCC GACGCTGGTG
CCCGCTGCGA CGACGCTGCC CACCGCTCCG CTGGCCAACG GACACGTGAA GTTCCTCGGG
AGCGTCTACA GCGGCCCGCA GGCACCTAAT CTCACCTCCT ACTTCAATCA GGTGACGCCG
GAGAATGCGG GCAAATGGGG CAGCGTCGAA GGCACGCGGG ACGTGATGAA CTGGACCGAA
CTGGACGCGG CCTACGCGCT GGCGAAGGCC AACCATATCC CCTTCCGTTT TCACGTGCTC
GTGTGGGGCA ACCAGCAGCC CATCTGGATC GCGAACCTGC CGCCTGCGGA GCAACTCGAA
GAGATCGAGG AGTGGTTTCA AGCGGTGGCC GCGCGCTACC CGGCGATCGA CTACCTTGAG
GTCGTCAACG AGCCGATCAA CGATCCACCG GATGGCATCG ACAACACGCC CTCGAACGTG
CCCGCCGACG GCAACTACAT GAACGCGCTC GGCGGCAGCG GCACCACCGG ATGGGACTGG
GTGCTGACGG CGTTTCGGAT GGCGAAGCGG ATTTTCCCGC CGACCACCCA GCTGATGCTG
AACGAATACA GCATCACCAA CGACACGACG CGAATGAACC GCTACATTCA GATCGTGAAC
CTGCTCAAGG CGGAGAACCT GATCGATGCG GTCGGCGTCC AGGCGCATTA TTTCTCGACC
CGGTCGTATT CCGGCAACCT GCCTGGCACA TCGGCGCAGA CGAAAGCGAA TCTGGATCTG
CTGGCCGCTA CGGGCGTGCC AATCATGGTG ACCGAGATGG ACGTCGACGG CGGGGCGTCG
ACGAGTGCGC TCGATGACGC GACGCAGCTG AGTGAATATC AGCGGATCTT CCCGATTTTT
TGGCAGCATC CGTCGGTGAT CGGGATCACG CTCTGGGGGT ATCGAACCGG CATGTGGCGA
GCGACGGCTT ACATCGTGAA CAGCGACGGT TCGGAACGGC CGGCGATGGA GTGGTTGCGG
GAGTACCTGA CCACCGGCGC GCCCGCGGTG GCGACGCAGC CGGCGAGTCA GACGGTGGCG
CTCGGCGGAA GTGTTTCCCT GACGATGGCG GCGACCGGCA CGCCAGCGCC GACGCTTTCA
TGGCAGCGTA ACGGCAGCAC CGTGGCCGGG GCGACCGCCG CCACGCTGAC TCTGCCAAAT
GTTCAGCCGG CCGACACCGG GATCTACACG GGCATCGCGC TCGGCGGCAC CGCGGGCACG
GCCGCGGCCA TCAGCACCCC GGTGATCGTC GGCATCTCCA CGGAGCAGCA AGTGGTCGGT
GCCGGCGAAC AGGTAGGCGA TCACGTGCCG CACCCGAACG GAAACTTCTA CGACCAGGTG
TTGCTGACCG GCGTCGCCGA GGCGATCAAG GCCGATCCGG ACAACGGCGA GATTACCCGT
ACATCGTTCA TCGATGCCGA CGGTGACATC GTGCAGGTGG AGTTTGGCGG ACCGGGCACG
CTTTCGCTCG TACTCGCGAA CGCGGGTGAT CGCGCTGCAC CGGAGAAATA CAACCAATCG
AACGTGCTCT ACATGAAGGG GCACGCCGGG ATCGTGATCA CCGGCGCGAA CGAAAACACG
AATGTGACGG TGTTCACCGT CGGCCGGGCG ACGGCCTACG ATCGCACGGG CCAATACAAC
ATCCTCAAAT CGCCGAACAC CACGGACAAC AATCCGGCCA ACAACGGCAG CCCGTTGTTC
GTCGGCCACG AGAACACCGT TTACGATGGC ATCGCGGATC TCGCGTTCAT CGCGATCTCG
AGCACGAACG GCCGGTTCGG CGGAATTCGT GCGGCCAACG CCAACTTCTA TGCCGCGCAA
GGTTTCACCG GGATCTACGC GCCGGGCGTG GAGTTTACCG GGCCGGTTTT CTTCGGTGAC
ATCATGGCTT ACGACAAAGC CAAGCCCGTG CTTCTGCTCG GCTCCGCGAG TGACGTGCGA
GTGACTGGTG GAAACATGGA ACAGATCAAT GCCCAGCCGG TACAGGTGAG CGGCGTCACG
CAGTTGCAGT TCAAGCCCGG CAGCGACTCG CACGGCAACA CCTTGCCGGC GCAGACGAAC
CGCGGCACCT ATCGGCAGGA CGGGGTCGAT GTCACCACTC AGATCGTGGT GAATCCGTCG
AACTGA
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| Protein sequence | MQTFRQILFS LLLGAAPTLV PAATTLPTAP LANGHVKFLG SVYSGPQAPN LTSYFNQVTP
ENAGKWGSVE GTRDVMNWTE LDAAYALAKA NHIPFRFHVL VWGNQQPIWI ANLPPAEQLE
EIEEWFQAVA ARYPAIDYLE VVNEPINDPP DGIDNTPSNV PADGNYMNAL GGSGTTGWDW
VLTAFRMAKR IFPPTTQLML NEYSITNDTT RMNRYIQIVN LLKAENLIDA VGVQAHYFST
RSYSGNLPGT SAQTKANLDL LAATGVPIMV TEMDVDGGAS TSALDDATQL SEYQRIFPIF
WQHPSVIGIT LWGYRTGMWR ATAYIVNSDG SERPAMEWLR EYLTTGAPAV ATQPASQTVA
LGGSVSLTMA ATGTPAPTLS WQRNGSTVAG ATAATLTLPN VQPADTGIYT GIALGGTAGT
AAAISTPVIV GISTEQQVVG AGEQVGDHVP HPNGNFYDQV LLTGVAEAIK ADPDNGEITR
TSFIDADGDI VQVEFGGPGT LSLVLANAGD RAAPEKYNQS NVLYMKGHAG IVITGANENT
NVTVFTVGRA TAYDRTGQYN ILKSPNTTDN NPANNGSPLF VGHENTVYDG IADLAFIAIS
STNGRFGGIR AANANFYAAQ GFTGIYAPGV EFTGPVFFGD IMAYDKAKPV LLLGSASDVR
VTGGNMEQIN AQPVQVSGVT QLQFKPGSDS HGNTLPAQTN RGTYRQDGVD VTTQIVVNPS
N
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