| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4567 |
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| Symbol | |
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| ID | 6204234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 5867518 |
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| End bp | 5869671 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641694235 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001821438 |
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| Protein GI | 182416372 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.79744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.181696 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAATG CTCCCGCTCT CCGTTCGTTG ATCTGGGAAT GGATTCAGGT CGCGCTGCTG
GGCGCGAACC TGATCTGGAC GACGCTGTGC CTCGGTGGAT TTCGGGCGGA GACGATGGTG
GTGACGAGCA TGCTGACGGG GCTGTTATTC GTCGTGCACT TGTTGGCGCG GGCCGACGCG
GCGGCGGCGC GGGTGTGGCC GGCAAATGGC GCGAATGGGG ACGAATGGAG GGGGGCTGCG
CCTGCGGTGG AGAGGGCCGA AGGGCCTCCT GATCCGGACG TGGCCCGCCG CATGAGCGGC
GGGATGGAAG GCACGGCAGT CCTCCCTGCG CTCACGCGCA AGGCCACGCT GGCGCCCCGC
CCTGGCGACG TTTCGCTGCA TCCTGCCAGC TGGCTCGTGC TTCCTTTTCT GGTCTACGCC
GCGGCGAACG TCGCATGGAT CTCGCCGGTG CCGTGGCTCG GCTGGCGCGA TTGGTTCGGC
TGGGCGCAGC TCGGCATCAT GTTCTGGGTC GCGCTCAATG GCGTGCGTTC GCCGGCCGCG
CGGGGCACGC TGTTCACGCT GCTGCTGCTG CTGGGCCTCA CCGCGGTCGT GCTCGGCTGT
TACCAGCGAT TCGTGCGGCC TGACTGGCTG ATGCTCGGTC GCACGCAGGT GCAGCAATTC
GTCGGGCGGG CGAGTGGATC GTTTGGCATT CCCAACAGTC TGGCCGCGTT GTTGCTGTTG
CTGCTACCGC CGTGCTGCGC ATTGGCGCTA CGGCGCGGGG CGAGTGCGGT GCAGCGCGTG
CTCTTCGGCT ATGTCGCCGT CGTGTTCCTG CTCGGGCTCG GGCTAACGGT GAGCCGCGGC
GCGTGGATCT CGCTCGCGGT CGTGCTGGTG GCCTGGCCCC TGTTCGCTCG CGGCGGTTCG
TGGCGAAGGC GGCTCGGGTG GACCGCGGTG GTGGGGGTGA CGCTGGGCGC GATCGCGCTG
ACGGCGTTTT TTCAGGTCGA CCTGGTGCGC GAACGCTGGA TCAAGCTGAA GCAGGACAGC
GGCGAGTTGT CGCGGCCGAT CCTGTGGCGG GGGGCGTGGA GGATTTTTGC GGAACACCCC
GTCTGGGGCA GCGGGGCGGG GAGCTTCGCG GTCGCATTCG AGAAACACCG GCCGGCGACA
TTTCAGGATG ATCCGCTGTG GGCGCACAAC GACTATCTGA ATACGCTGAG CGACTATGGC
GCCGTGGGGT TCACGCTCTG CTTCGGTGCG TGGGCCGTGG TCGGGTGGGG CGCGCACCGG
GCCCGGAAGC GAGGTAGGAC GGGATTTCCG GATCAGGCGG CGCTCCATGC GGCGGCGGGA
TCGGGAGACT CCGCGCTACA AGACCCTCCC GTGACCGCGG CGGGCCTTCT CGACTCGGCG
ATGTTTCGTC GCGGGCTTGC GGCGGGGCTG GTGGCATTCG CGCTGCAGTT GTTCGTCGAT
TTCCATTTCA AGATTCCCGC GCTCGCGCTC GCGTTCGCGG TCGTCGCGGC GCTGTACGTC
CAGGCGGCGT GGCCGCAGTG CCGCGCCCCG GCGGAGCGGG GCGACTTCTT CAAGGCGTGG
GGTTTTGCCG CGGTCGCGTT CGCGACCCTG ATCGGCCTGA TCGGACACGT GCTACCGCTC
TACCGCGCCG AAGCGCTGCG CTACGACGCA CGGCGCGCGA TCGACCGGCT GGCGGTGCGC
GCGACACCGG TGTCGGAATG GCGGCCGGTG CTGACGGATG CGCTAAAAGC GCTGCAGCGC
GCCAACCGGA TCGACCCGAC CAACGCGGCG GCGTGGGCGG ACCTATCCTA CGTGAAGGCG
CTGTTCGCCT GGATCGAGCC GACGCGGCTG GACGCGTTCG CGATCGAGGC GGAGCACGCT
GCGGACCGGG CGCTCGCGCT TTCGAAGGCT GATCCGGAAT TCTGGATCCG GCGCGGAGTC
GCACTCGACA TGCGACGGCG ACATCTCGAA GCAGGGGCGG CGTTTGTCCA AGCGGTGGCG
ACCGCGCCAG CATGGGCCGG CGCCTGGTAT CATCACGCCT TTCACTTGAG TTTGATCCCG
TCGCAGCGCG GGCGCGCGCT CGCGGCGGTG GAGTTCTGCT TGCGCCTTGA CGCAGGAAAC
CGCGAGGCGC AAGCATTGCG TCGACGCCTG ACTGAGTCTG GTGGCGCCCC CTGA
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| Protein sequence | MSNAPALRSL IWEWIQVALL GANLIWTTLC LGGFRAETMV VTSMLTGLLF VVHLLARADA
AAARVWPANG ANGDEWRGAA PAVERAEGPP DPDVARRMSG GMEGTAVLPA LTRKATLAPR
PGDVSLHPAS WLVLPFLVYA AANVAWISPV PWLGWRDWFG WAQLGIMFWV ALNGVRSPAA
RGTLFTLLLL LGLTAVVLGC YQRFVRPDWL MLGRTQVQQF VGRASGSFGI PNSLAALLLL
LLPPCCALAL RRGASAVQRV LFGYVAVVFL LGLGLTVSRG AWISLAVVLV AWPLFARGGS
WRRRLGWTAV VGVTLGAIAL TAFFQVDLVR ERWIKLKQDS GELSRPILWR GAWRIFAEHP
VWGSGAGSFA VAFEKHRPAT FQDDPLWAHN DYLNTLSDYG AVGFTLCFGA WAVVGWGAHR
ARKRGRTGFP DQAALHAAAG SGDSALQDPP VTAAGLLDSA MFRRGLAAGL VAFALQLFVD
FHFKIPALAL AFAVVAALYV QAAWPQCRAP AERGDFFKAW GFAAVAFATL IGLIGHVLPL
YRAEALRYDA RRAIDRLAVR ATPVSEWRPV LTDALKALQR ANRIDPTNAA AWADLSYVKA
LFAWIEPTRL DAFAIEAEHA ADRALALSKA DPEFWIRRGV ALDMRRRHLE AGAAFVQAVA
TAPAWAGAWY HHAFHLSLIP SQRGRALAAV EFCLRLDAGN REAQALRRRL TESGGAP
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