| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4558 |
|---|
| Symbol | |
|---|
| ID | 6208769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 5858273 |
|---|
| End bp | 5859502 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641694226 |
|---|
| Product | PepSY-associated TM helix domain-containing protein |
|---|
| Protein accession | YP_001821429 |
|---|
| Protein GI | 182416363 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.179796 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATTC GTCGGACCAT CTTCTGGCTC CACTTGATCG CAGGAATCAT CGCCGGGCTC
TCGATCGCCG TGATGTGTTT CACCGGCGTG ACGCTCGCGT TCGAGAAACA ACTCGTCACG
TGGTCCGAGC GTGACGCACG CCAGATTGAG CCGCCCATGG GCTCCGCGGC GCGACTGCCG
GTCGAAGAGC TTCTCGCGCG CGTCCGTGCC GTGAAACCCG ACGCGAAGCC CGGCTCACTC
ACGATCTCGT CCAACCCGCG CAGCGCGGTC GCGGTGTCGC TCGGCCGCGA CGCCACCGTT
TTCGTGGACC CCTACGCCGG CGCCGTTCGC CGGCCGGCGT CGACGCGGAT GCACGATTTC
CTGCACGTGA TGGAAGACTG GCACCGGTTT CTGGCGCTGA CTGGCGATCA CCGTCCGACG
GGCAAACTGA TCAACGGCAT CTGCAATCTC GCGTTCTTCG TGCTGGCGGC GACCGGGCTG
TATTTGTGGA TTCCGCGCCG GTGGTCGTGG CGGTCGATTC GCGGCGTGGT GTGGTTTCAG
CGCGGCCTCG AGGGCAAACC ACGCGACTTC AATTGGCACA ACGTGATCGG CCTCTGGAGC
GCACCCGTGC TCATCGTGCT CACGCTCACG GCGGTGCCGA TTTCGTTCCG CTGGGGCAAC
GCCCTCGTCT ACCGCCTCGT CGGGGAGGAA CCGCCCGCCC GCCAAGGCCC GCCGGGGACC
GGATCGCCGG CAGTCGAGCT GCCCGCGCCG ACGACCGGAG CGCAGCCGCT GTCGCGCGAC
GCGCAGTTCG CCGCGGTACG CGCTGCATTT CCGGATTGGG AGCAAATTAC GCTCCGGCTC
AGTGTGCCCG GCAGCGGCGT TCCGGGAGCG CGGATAACCA CGTCTGCATC CGCACAGCGA
ACGGACGCGG TCGCGCTCGC AGCCGAGCCG GCCACGTTCG TCGTCAAGAC GCCACCGACT
TGGCCGCGCA CCGCGACGAC CACGGTGACG CTGAATCCAT TCACCGGCGA CGTGATCCGG
CGTGAGGCAT TTTCGGACCA ATCGGCCGGC CGCCAGCTTC GGAGCTGGAC CCGATTCCTG
CACACCGGCG AAGCGCTCGG CTGGGCGGGC CAGCTCGCCG CGGGCGCCGC GTCCCTCGGT
GGTTGCTTCC TGGTCTATAC CGGCCTCGCT CTTTCCTGGC GGCGCTTCTT CGGCAAACGG
GGAGCGAAAA CGCCCGCAAC CGCGAGCTGA
|
|---|
| Protein sequence | MTIRRTIFWL HLIAGIIAGL SIAVMCFTGV TLAFEKQLVT WSERDARQIE PPMGSAARLP
VEELLARVRA VKPDAKPGSL TISSNPRSAV AVSLGRDATV FVDPYAGAVR RPASTRMHDF
LHVMEDWHRF LALTGDHRPT GKLINGICNL AFFVLAATGL YLWIPRRWSW RSIRGVVWFQ
RGLEGKPRDF NWHNVIGLWS APVLIVLTLT AVPISFRWGN ALVYRLVGEE PPARQGPPGT
GSPAVELPAP TTGAQPLSRD AQFAAVRAAF PDWEQITLRL SVPGSGVPGA RITTSASAQR
TDAVALAAEP ATFVVKTPPT WPRTATTTVT LNPFTGDVIR REAFSDQSAG RQLRSWTRFL
HTGEALGWAG QLAAGAASLG GCFLVYTGLA LSWRRFFGKR GAKTPATAS
|
|---|
| |