Gene Oter_4548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4548 
Symbol 
ID6208079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5848120 
End bp5848464 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content64% 
IMG OID641694216 
Producthypothetical protein 
Protein accessionYP_001821419 
Protein GI182416353 
COG category[S] Function unknown 
COG ID[COG1993] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.554874 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCTGC CCGAAGACGC CACCCTGCTA CGAATTTTCA TCGGCGAGTC AGACCGGTTT 
GAACACCGCC CGCTGTACGA GGCGATCGTG CTCAAGGCCC GCGAAATGAA ACTCGCAGGC
GCCACCGTGC TGCGCAGTCC GCTCGGCTTC GGCGCCGCGA GTCATCTGCA CACCGCCAAG
ATCCTGCGGC TTTCCGACGA CCTGCCGATG GTGATCGAGA TCGTCGACGC GGCCGAGAAG
ATCAACGCGT TCCTCGCCGT GCTCGACCCC ATGATGGGCG GCGGCCTGGT CACACTCGAA
CCCGTGCGCG TGATCCACTA CCGGAGCGGG CCGAAGAAAG ATTGA
 
Protein sequence
MHLPEDATLL RIFIGESDRF EHRPLYEAIV LKAREMKLAG ATVLRSPLGF GAASHLHTAK 
ILRLSDDLPM VIEIVDAAEK INAFLAVLDP MMGGGLVTLE PVRVIHYRSG PKKD