Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4526 |
Symbol | |
ID | 6205357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 5820028 |
End bp | 5820795 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641694194 |
Product | sigma-70 factor |
Protein accession | YP_001821397 |
Protein GI | 182416331 |
COG category | [S] Function unknown |
COG ID | [COG3828] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.74971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGC GACTCCTGTC CCTCTCGTTC CTCGCGCTGC TCGCCGCCCC GGCGATGCGC GCCGAGCAGT TCAGTGCACT GCTCTTTTCC AAAACCGCCG GCTGGCATCA CGACTCGATC AACACCGGCG TGATCGCGAT CCAGGCACTC GGAAAGCTGC ATGATTTTAA CGTCTTCTGG ACCGAGGACG CGAACCGCGT GTTCAACGAC AAGGAGCTCG CGAAATACAA GGTGGTGATC TTCCTCTGCA CCACCGGCGA CGTGCTCAAC GACCAGCAGC AGGCGGCGTT CGAGAAGTTC ATCAAGAACG GCGGCGGGTT CGTCGGCATC CACAGCGCGT CGGACACGGA ATACGAGTGG CCGTGGTATA CGAAGATGGT TGGACGGATG TTTCACATCC ATCCGGTGGT GCAGACCGCG ACGATGAAGG TGGAGGACTA CAACTTCCCC GGCATGGATC GGTTTGCGAA GCGGTTTCTG TTCACGGAAG AGTGGTATGA GTTCGGCCCG CCGCAGTCGC AGGCGCTGAA GTATCTGCTC TCGGTCGACG AGAAGACCTA CAAGCCCGCG GCCAACTGGG GCACGAAGCA GGGCAAGGGC ATGGGCGACT TCCATCCGAC CTCCTGGTAT CAGAACTACG ACGGTGGCCG GGCGTTCTAC ACGGCGATGG GCCATCTGCC GGCGACCTAC CTCGACGCGA ATTTCATCCA CCACATCTAC GGCGGCATTT ATTGGGCGGC GACGGGCAAC GAATTTCACG CCGAGTAG
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Protein sequence | MKLRLLSLSF LALLAAPAMR AEQFSALLFS KTAGWHHDSI NTGVIAIQAL GKLHDFNVFW TEDANRVFND KELAKYKVVI FLCTTGDVLN DQQQAAFEKF IKNGGGFVGI HSASDTEYEW PWYTKMVGRM FHIHPVVQTA TMKVEDYNFP GMDRFAKRFL FTEEWYEFGP PQSQALKYLL SVDEKTYKPA ANWGTKQGKG MGDFHPTSWY QNYDGGRAFY TAMGHLPATY LDANFIHHIY GGIYWAATGN EFHAE
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