| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4508 |
|---|
| Symbol | |
|---|
| ID | 6204531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 5798507 |
|---|
| End bp | 5798791 |
|---|
| Gene Length | 285 bp |
|---|
| Protein Length | 94 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641694176 |
|---|
| Product | hydrogenase assembly chaperone hypC/hupF |
|---|
| Protein accession | YP_001821379 |
|---|
| Protein GI | 182416313 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0298] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00074] hydrogenase assembly chaperone HypC/HupF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.701167 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.209775 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTCTCG CCGTGCCGGG TCGAATCCTC GCGATCTCCG GAGCTGATTT CTTCCGCACC
GCGCGCGTGG ATTTCGGTGG AATCGTCAAG GAAGTGAACC TGGCCTGCGT GCCGGAAGCT
CGCCTCGACG ATTACGTGCT CGTCCACGTC GGTGTCGCGC TCAGCGTCAT CGACGAACGC
GAGGCCGCAG AGGTGTTTTC CTACCTCAAA CAAATGGAGG AGCTCGCGGA GTTGGCGCCG
CCGCCGCCGG TCGACTCTTC GCCCCCTGCT ACGCCTCCGT CGTGA
|
|---|
| Protein sequence | MCLAVPGRIL AISGADFFRT ARVDFGGIVK EVNLACVPEA RLDDYVLVHV GVALSVIDER
EAAEVFSYLK QMEELAELAP PPPVDSSPPA TPPS
|
|---|
| |