| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4475 |
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| Symbol | |
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| ID | 6207931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5765439 |
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| End bp | 5766545 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641694141 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_001821346 |
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| Protein GI | 182416280 |
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| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family
[COG1834] N-Dimethylarginine dimethylaminohydrolase |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCC AGGCAGCTCG CAACCAGCAC GCAGAGTTGG CGCGGATCTT GGGGAAACTT
GGCGCGAAGG TGAAGTTCGC AGCAGGTCAA GCAGACGATC CCCGCGGCGC ACTCGTGGAG
GAATCCATTG TGGTGCTGCC AGAAATGGGA ATTCTTGGGA GGACACAGGA CAGCTCGCAA
GGGGCCGCAG CTGAATCGAT GGTGCCGCTC CTGGCGCAGC ACCGGCCGAT CCAGCGCATC
GCAGACCCTG CGCTTTTGGA CGGCCGCGAC GTGCTGCGGA TTGGACGAAC CCTGTTTGTA
GCGCCGACCG CAACCACCAA CGCAGAAGGA ATCGCCGATC TCAGCGCTAT CGTGGAGCCG
TTCGGATACG AAGTGCGTGA AGTTGAGCTT CACGCCTGTG CTCACCTGAA ACTCGCTGCG
AGCTTCGTGC CTCCGCACTA CCTTGTTTTG AATGCTGCCT GGGCGAACCC GAAGCAATTC
GGCGATCTTG TGGTGCTTGG CGTGGATGAG CGCGAGCCGC TGGCGGCGAG CACGCTCCCG
GTCAACGGCA CAACGCTCGT GAGCGGCTCG TATCCGAAGA CGGAACGGCG GCTGCGCAAC
GCCGGCATCA CCACTCGCCG CGTCGAAGTG TCCGAGCTGC ACAAGATGGA AACGGGATTG
TCCTCACTCG CCATCATCGT CGAGCCGCGC GCCGTGCGAT CGGCAAGTTC GCCGGTGGGA
TTTAAGGTAA TCCAAGCGCC AACTGCGCCG CCAGCGCCCG GGCTGTTCGC CCCCGCCATC
GTGCATGGCG GCGTCGTCTA TGTTTCCGGT CAGCTTCCAA TCGATCCCAC GACCGGGCGG
GCGGTCGAGG GAGAAATCGA GGACCAAACA AATCAAGTGC TCCGCAATCT ATCCGACGTT
CTTTCGGCCT CCGGCAGCTC ACTCGGCCGC GTCTTGCGTC TCACGTGCTA CGTCGCCGAC
ACGAAGCACG TGGACCGAGT GACGGCCGCC TGCGCGCTAG CCCTCACCGG ACACAGGCCT
GCCGGCAGCG TTGTGGCGGC GCGAACGCTG CACCCCGGCT GCGCGATCGC AGTCGACGCG
ATCGCGGCTG TCACTGACGA ACGATGA
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| Protein sequence | MDIQAARNQH AELARILGKL GAKVKFAAGQ ADDPRGALVE ESIVVLPEMG ILGRTQDSSQ
GAAAESMVPL LAQHRPIQRI ADPALLDGRD VLRIGRTLFV APTATTNAEG IADLSAIVEP
FGYEVREVEL HACAHLKLAA SFVPPHYLVL NAAWANPKQF GDLVVLGVDE REPLAASTLP
VNGTTLVSGS YPKTERRLRN AGITTRRVEV SELHKMETGL SSLAIIVEPR AVRSASSPVG
FKVIQAPTAP PAPGLFAPAI VHGGVVYVSG QLPIDPTTGR AVEGEIEDQT NQVLRNLSDV
LSASGSSLGR VLRLTCYVAD TKHVDRVTAA CALALTGHRP AGSVVAARTL HPGCAIAVDA
IAAVTDER
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