| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4425 |
|---|
| Symbol | |
|---|
| ID | 6205037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 5714022 |
|---|
| End bp | 5714318 |
|---|
| Gene Length | 297 bp |
|---|
| Protein Length | 98 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641694091 |
|---|
| Product | glycoside hydrolase family 13 protein |
|---|
| Protein accession | YP_001821296 |
|---|
| Protein GI | 182416230 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.341885 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCATC GATCCATGAA GAAGAAGAAA AAACCGACGA ACCTCGCCCG GGGCTTGTTC
ACCTACCTCG ATCCCCTCGC CACCACCGTC TTCGTTGCCG GCTCGTTCAA CGATTGGAAG
CCCGATGCCG CCGCCATGAT CCAAGTGATA CCCGGACGAT GGGAACTGGA AGTGTCCCTC
CCTCCCGGTC GGCACGAATA TCTGTTCGTC GTGGACGGCA AATGGGTTGT CGATCCCACG
GCCAAAGAGA CCTGCCCAAA CCCGTATGGA GGTCTCAACG CCGTTGCGCA GGCGTAG
|
|---|
| Protein sequence | MHHRSMKKKK KPTNLARGLF TYLDPLATTV FVAGSFNDWK PDAAAMIQVI PGRWELEVSL
PPGRHEYLFV VDGKWVVDPT AKETCPNPYG GLNAVAQA
|
|---|
| |