| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4421 |
|---|
| Symbol | |
|---|
| ID | 6206013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 5710806 |
|---|
| End bp | 5711261 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641694087 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001821292 |
|---|
| Protein GI | 182416226 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.454307 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.20357 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGA TTCGAATCCT GATCCTTGTC GCAATTCCGT TCGTCGGCGC TGGCGTGAGC
CTTCACGCCG GGCACGGCAG CATGCCCGCC ATGGCCGGCC ACGAACATCG GGCCGATGCG
TCGTCGCTCT CCGACGCGCA GAAGCAGTAT CTCGTCAGCT ACGATGCCGT CCGCGCCGCG
CTCGCGGCGG ACGACCTCGC CGGCGCGAAA TCCGCCGCCG CGGATTTGCC AGATTCGCCC
GCGGCAAAGC GGCTCGTGCG GGCCGACTCG CTCAACACCG CGCGGGTTGC GTTCAAGAAA
CTCAGCGAGG TCGCAGTGCA AGTCGCGAAA GGGCACGACG GATACTTCGT CTTCAATTGC
CCGATGGTCG GCAGCGACTG GGTGCAGACG ACGAAAACAG CTTCGAACCC CTATGTGGGG
CAAAAGATGC CCACCTGCGG CGTCCTGAAG GACTGA
|
|---|
| Protein sequence | MKTIRILILV AIPFVGAGVS LHAGHGSMPA MAGHEHRADA SSLSDAQKQY LVSYDAVRAA
LAADDLAGAK SAAADLPDSP AAKRLVRADS LNTARVAFKK LSEVAVQVAK GHDGYFVFNC
PMVGSDWVQT TKTASNPYVG QKMPTCGVLK D
|
|---|
| |