| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4393 |
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| Symbol | |
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| ID | 6208647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5685606 |
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| End bp | 5686190 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641694059 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001821264 |
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| Protein GI | 182416198 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.826665 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGC CGGGCATACA TCGTCGCTTG TCGGCCGCGG ACGTGGATCG GCTCCTTGCG
CATCGAGCTG CTTTCCACGG TCTGCTCACG CAACAACTCG GGTGCCCGGT GGCGGCCGAA
GATCTCATGC AAGGAAGCTT GGCGGCGGCG CTGAACCGGT GCGACAGCAT GCGACGTGGC
GAGAGCATGG TGGGCTGGTT TTACCGCGTT CTCGGACTGG CGGTGACGAA TCGCACCAGC
GGCAGCCCGG CGGCAGGTGG GCGAATGCAG CGGCTTCGGC AGAAAGCCGG GACGCACCGG
GCAATCAGCA CGGAACTCGA TACGGTGGTT GGCGGCTGCT TCCAGTGCGT GCTCGGCGCG
CTTCGGCCGC GATACGCCGA AGCGATCCGG CGCATCGACC TGCGAGGAGA GCCGGCTGTG
CTGGTTGCTC ATGAGATGGG GATCTCCGTG CCGACGCTTT GTGTCGTGTT GCATCGTGCG
CGGATCGCAC TTCGCCGGCA CCTCGCGTTC GTGTGCGAAG GGTCGCTCGG TGGCAGACCT
TCGGTTGCGA ATGCGCCGAA AGGCTCCGAG GTTCGCGCGA AATGA
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| Protein sequence | MLKPGIHRRL SAADVDRLLA HRAAFHGLLT QQLGCPVAAE DLMQGSLAAA LNRCDSMRRG
ESMVGWFYRV LGLAVTNRTS GSPAAGGRMQ RLRQKAGTHR AISTELDTVV GGCFQCVLGA
LRPRYAEAIR RIDLRGEPAV LVAHEMGISV PTLCVVLHRA RIALRRHLAF VCEGSLGGRP
SVANAPKGSE VRAK
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