| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4329 |
|---|
| Symbol | |
|---|
| ID | 6205169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 5615908 |
|---|
| End bp | 5617317 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641693996 |
|---|
| Product | oxidoreductase domain-containing protein |
|---|
| Protein accession | YP_001821201 |
|---|
| Protein GI | 182416135 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.803175 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTT TCGCCCCACA AACCGGTTCA CTTTCGCGGC GTGACTTCTG CCGCACGATC
GCGACGGCCA CGGCGGTCCT GGCCGTGCCG AACATCATTC CCTCGCGGCT GCTCGCCGGC
GCGGCTGCCC CGAGCAACCG GATCCGCGTC GGCCAGATCG GTTGCGGCCG GATCGCGCGT
GGACACGACA TGCCCGGGGT ATTCAACTCC GGGCTCGCCG ACATTGTCGC GCTCTGCGAC
GTGGACCTGC GGCGCGTGGC GGAGGGACGG GATCTCGCGG CCAAGTTCTA TCGCGACGCC
GGCAAGACGG CGCCCGGGTT TGTCACCTAC GGCAACTATC GCGAGCTGCT GGCCCGCGGC
GACATCGACG CCGTGGTGTT AAGCCTGCCG GATCACCAGC ACGCGGAGAT CGCAGTGGCC
GCGCTGCGGG CGGGGAAGGA CGTTTACCTC CAAAAGCCGT TCACGATGAC GCACGCTGAG
AGCGTGCTGT TGCGCGACGA GGTGGCGAAG AGCAACCGAA TCCTGCAGGT CGGCAGCCAG
CAACGCTCGT GGGGCGAGAC GCAGCAGTTC CGCAAGGGCT GCGAATTCGT GCGCAGCGGC
CGGGTGGGCC GGCTGACGCA CGTCGAAATC GGGCTGCCGA TCGATCCGAC GGCGCCCGAC
AGCCCCGAGC AGCCGATTCC GGCGAACCTG AACTACGACG CGTGGCTCGG GCCCACGCCG
CAGGTCTACT ACACGGAGCA GCGCGTGCAT CCGCAGAGCG GCTACGACCG GCCCGGCTGG
CTGCGCAACG AGTCCTACTG CCTCGGCATG ATCACCGGCT GGGGCGCGCA CCATTTCGAC
ACCGCGCACT GGGGCATGGA CATGGAGCTC AGCGGACCGA TCAAGGTCGA GGGGCGCGCG
GAGTTTCCGA CCAACAAGAT CTGGAACGTC CACGGCGCCT ACGACGTCGA GCTGCTCTAT
CCGAGGGACA TTCACCTGAA AGTCTCGGAC AAGCTGCCGA ACGGCGTGAA GTTCATCGGC
GAGGAGGGCT GGATTTTCGT GTCGCGCGAA CCGCAGGGGC AGCAGACCTC GAGCGATCCG
GCGATGCGGC CGACGGACCT CAAGCCGCTC GACGCGAGCG ATCCGAAGCT GCTGGATCCG
AACGGCGTGA CCGTGAAATT CCTCGAGAGC AGCAGTCATC ACAAGAACTG GCTCGACTGC
GTGATCTCGC GGCAGACGCC GCTTTCGCCG GCGCCGATCG CGCACCACGC GAACACCGCG
TGCATCGTGA GCTGGATCGC GATGAAGCTG GGCCGTCCGC TGACGTGGGA CTTGAAGGCG
GAGAAATTCG TCAACGACGC CGAGGCGAAC GCGCTGTTGT CGCGGTCGGA ACGCGCGCCG
CACGGCGTCC ACAATCTGAA ACGCGTGTAG
|
|---|
| Protein sequence | MKTFAPQTGS LSRRDFCRTI ATATAVLAVP NIIPSRLLAG AAAPSNRIRV GQIGCGRIAR
GHDMPGVFNS GLADIVALCD VDLRRVAEGR DLAAKFYRDA GKTAPGFVTY GNYRELLARG
DIDAVVLSLP DHQHAEIAVA ALRAGKDVYL QKPFTMTHAE SVLLRDEVAK SNRILQVGSQ
QRSWGETQQF RKGCEFVRSG RVGRLTHVEI GLPIDPTAPD SPEQPIPANL NYDAWLGPTP
QVYYTEQRVH PQSGYDRPGW LRNESYCLGM ITGWGAHHFD TAHWGMDMEL SGPIKVEGRA
EFPTNKIWNV HGAYDVELLY PRDIHLKVSD KLPNGVKFIG EEGWIFVSRE PQGQQTSSDP
AMRPTDLKPL DASDPKLLDP NGVTVKFLES SSHHKNWLDC VISRQTPLSP APIAHHANTA
CIVSWIAMKL GRPLTWDLKA EKFVNDAEAN ALLSRSERAP HGVHNLKRV
|
|---|
| |