| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4306 |
|---|
| Symbol | |
|---|
| ID | 6208535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 5583752 |
|---|
| End bp | 5585095 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641693974 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_001821179 |
|---|
| Protein GI | 182416113 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCCG CAGTTTCCTC GATCCTGTTT ACTTTCGGAG CGGTCGCGAC CGTCACGCTG
CTCCTCACGG GGGCCACGGC CCCTCGTTCC GCCTCCGCCG GCACGTCCGG CGACGCCTTC
GATTACCGCG TTCTGCAAAA CAACTTTCAG CTGTTTCACG AAGGGCAGCG CATCTTTCGT
TTCGATACGT TCGGCAGCGA AGCCTTCTGG GGCGATGCGC TGAAACTCCA TCAAGCGATC
GCCGGCCAAG CCAACGGCGG AGTGGGTGGT GGCGTCAGTC CGGAAACCGC GCTCGCCGTC
GGTCTGAAGG TCGACAGCGA AGCGATTCCC CGCTCGGTCG CCACCGCTCT TCGACAGGGG
AAGGTTGATC TGAAGAATCC CGCGACCACG CTCGCGCTGC TGAAATTCGG CGCGGTCGTG
GGCGTCAAGG GTACGTTCGA TCGCAAGGGC AAGCTCACCG CCGTCGGCAT CCAGTGCTCG
CTTTGCCACT CCACCGTCGA CGACTCCTTC GCCCCCGGCA TCGGCAAACG GCTCGACGGC
TGGCCCAACC GGGACCTCAA CGTCGGTGCC ATCATCGCAC TGGCTCCGGA TCTTTCGGTG
ATCGCCAACT TACTCGGCGT GGACGCGGAC ACCGTGCGCG AAGTCCTGCA CAGTTGGGGC
CCGGGCAAGT TCGACGCCTC GCTGCTACTC GACGGAAAAG CCTTCCGGCC TGACGGCGGC
GCCGCGGCCA CGTTGCTGCC TGCGGCGTAC GGCCTCGCCG GCGTGAATCT CCACACCTAC
ACGGGCTGGG GCTCGGTCAC GCATTGGAAC GCCCTCGTCG CCAACCTCGA GATGGGTGGC
CGCGGCACGT TCTACGATCC CCGCCTGGCC GACGCGGAGA AATTTCCCAT CGCGGCGAAG
CGCGGTGCGT TCGACGTGCG CAACACCCCG GATCTCGTGA CCTCGAAGCT GCCCGCACTG
CATTTCTATC AGCTCGCGTT GCCGGCGCCG AAGCCGCCGC GCGGCAGCTT CAATGCCGCC
GCCGCCGAGC GCGGACGCGC CGTGTTCAAC GGCAAGGCGC AGTGCGCGAC GTGCCATGTG
CCACCGCTGT TCACCGAACC AGGCTGGAAC ATGCACACCG CGGCGGAAAT CGGCATCGAC
GACTTCCAAG CCATGCGCTC GCCTGACGAG CACTACCGCA CAACGCCGCT CAACGGTCTG
TTCGCTCGCG AAAAGGGCGG ATTCTACCAC GACGGACGTT TCGCCACCTA TCGGGCCGTG
GTCGATCACT ATGACGCCCA CCTCCATACC GGACTCGGCG AAAGCGAGAA GAACGACCTG
GTCGAATATC TGAAATCGCT GTGA
|
|---|
| Protein sequence | MKPAVSSILF TFGAVATVTL LLTGATAPRS ASAGTSGDAF DYRVLQNNFQ LFHEGQRIFR
FDTFGSEAFW GDALKLHQAI AGQANGGVGG GVSPETALAV GLKVDSEAIP RSVATALRQG
KVDLKNPATT LALLKFGAVV GVKGTFDRKG KLTAVGIQCS LCHSTVDDSF APGIGKRLDG
WPNRDLNVGA IIALAPDLSV IANLLGVDAD TVREVLHSWG PGKFDASLLL DGKAFRPDGG
AAATLLPAAY GLAGVNLHTY TGWGSVTHWN ALVANLEMGG RGTFYDPRLA DAEKFPIAAK
RGAFDVRNTP DLVTSKLPAL HFYQLALPAP KPPRGSFNAA AAERGRAVFN GKAQCATCHV
PPLFTEPGWN MHTAAEIGID DFQAMRSPDE HYRTTPLNGL FAREKGGFYH DGRFATYRAV
VDHYDAHLHT GLGESEKNDL VEYLKSL
|
|---|
| |