| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4300 |
|---|
| Symbol | |
|---|
| ID | 6208363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 5578896 |
|---|
| End bp | 5579282 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641693968 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001821173 |
|---|
| Protein GI | 182416107 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3189] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0294544 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTGC GCATCGTCCG CCTCGGCACC CCTCGGCAGC CCGACGAGGG CCTTCGCATC
GGCACCGTTC GTCGTCCTCC ACGTGGCGTC CCCAAGGAGC AATTCGCGAA ACAAAATTGG
TACGACGTCT GGTTCCCCAA TCTCGCGCCG AGCCTCCCAG TGATGAAGTC CGCGCTGAAA
GCGACCACGC CGGCGCAGTG GGCGGCCTTC GTCCGCAGCT ACAAGTCCGA GATGGCCCAG
CCCGCCGCCC GCCACGACGT CGCCCTCCTG GCCGCGCTCT CGCGGCACAC CAACTTCTCG
GTTGGCTGCT ACTGCGAGCG CGAAGAGCAC TGCCACCGCT CGGTACTGCG GCAGCTGCTC
CTCGAAGCGG GGGCGAAGGT CGAATAG
|
|---|
| Protein sequence | MSVRIVRLGT PRQPDEGLRI GTVRRPPRGV PKEQFAKQNW YDVWFPNLAP SLPVMKSALK
ATTPAQWAAF VRSYKSEMAQ PAARHDVALL AALSRHTNFS VGCYCEREEH CHRSVLRQLL
LEAGAKVE
|
|---|
| |