| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4281 |
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| Symbol | |
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| ID | 6207549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5549330 |
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| End bp | 5550694 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641693949 |
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| Product | pectate lyase |
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| Protein accession | YP_001821154 |
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| Protein GI | 182416088 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3866] Pectate lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTTT TCCGAACGAG TTTCCTTCGC CCTGCTGTTT CCTGCGCGTG CGTGTTGCTC
GCCGGCTTGA CCACGGCCGC GTCCGCCGCG GTCTCGCCGC CTTCCCTCGC GGTCCCCGCC
TTTCCCGGCG CCGAGGGCGC CGGAGCACAC ACGCCCGGCG GCCGCGGCGG TCAGGTGTTG
TTTGTCACCA ACCTCGACGA CTCCGGCCCC GGCAGCCTGC GCGCCGCCTG CGAAACCGCC
GGCCCGCGCA CGATCCTCTT TCGTGTCAGC GGCACCATTC AGCTGAAACG CCCGCTCATC
GTCACGAAAC CGTTTCTCAC GATCGCCGGC CAGTCCGCGC CCGGCGACGG AATCTGCCTG
CGCGACTATG CATTCGGCGT CGCCACCCAC GACGTCGTGG TGCGCTATCT CCGCTTCCGG
CTCGGCGACG AAACCGCGCA GGAATCCGAC AGCGCCGATT TCTTCCTCGG CGCCCGCAAC
TGCATCTTCG ATCACTGCTC CGCGACGTGG TCCATCGACG AATGCCTCTC GCTCTCCGGT
CGGGTCACCG ACGTGACGGT GCAATGGTGC CTCATCGGCG AGCCCCTGCA CGCAAGCAAA
CACAAGAAGG GCGCCCACGG GCTCGGTTCG CTTTCCCGCG CCATCGGTCC GGTCACGTGG
CACCACAATC TCTGGCTTCA CACGCACTCG CGCAATCCGC GGCTCGGCGA CAACTATGGC
CAGCCGCCGT ATCCGTCTTT CGACGTCCGA AACAACGTGG TCTATAACTA CATTTCAACC
GCCGCCGGTC TCACGCAGGG CACGTTCACG GTCAACTACG TCGGCAATTA CCTCCGCCCC
GGCCCGGACA CGCGCACGTC GAAACCCATC CAGATCGGCT TCCCGTCCAA TCTCGAGTTC
TACCTCGCCG GCAACGTGCT CGATGGCGAC GAGGCGCTCA CGGCCGACAA TCGCGCGATG
TTCAGCGCCA CCGAAGCGGA CGGCCGCGTG CAGGTGCGGT TTCAGGCGCA GCCGTTCCCC
GCCGCGCCCG TCACCACGAC CTCCGCCTCC GCGGCCTTCG AACAGGTGCT CGCCGAGGTT
GGTGCCTCAC GGCCGCGGCG TGACGTCGTC GACGCGCGTT TGGTGGGCGA TGTGCGCCAA
CGTTCCGGCC GGATCATCAA TTCCCAAACG GAGGTCGGCG GCTGGCCGTT GCTGAAATCC
GCCGCTCCTC CACTGGATTC CGATCAGGAC GGCATGTCCG ACGACTGGGA GCAGGCGCAT
CAGCTGAATC CTCGCGACCC CGCCGACCGC AACGACGATC CGGGCCGCGA CGGCTACACC
CATCTCGAGG AATTCCTCAA CCAGACCGAT CCGCACGCCA GCTAG
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| Protein sequence | MRLFRTSFLR PAVSCACVLL AGLTTAASAA VSPPSLAVPA FPGAEGAGAH TPGGRGGQVL
FVTNLDDSGP GSLRAACETA GPRTILFRVS GTIQLKRPLI VTKPFLTIAG QSAPGDGICL
RDYAFGVATH DVVVRYLRFR LGDETAQESD SADFFLGARN CIFDHCSATW SIDECLSLSG
RVTDVTVQWC LIGEPLHASK HKKGAHGLGS LSRAIGPVTW HHNLWLHTHS RNPRLGDNYG
QPPYPSFDVR NNVVYNYIST AAGLTQGTFT VNYVGNYLRP GPDTRTSKPI QIGFPSNLEF
YLAGNVLDGD EALTADNRAM FSATEADGRV QVRFQAQPFP AAPVTTTSAS AAFEQVLAEV
GASRPRRDVV DARLVGDVRQ RSGRIINSQT EVGGWPLLKS AAPPLDSDQD GMSDDWEQAH
QLNPRDPADR NDDPGRDGYT HLEEFLNQTD PHAS
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