| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4193 |
|---|
| Symbol | |
|---|
| ID | 6208374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 5420504 |
|---|
| End bp | 5421328 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641693861 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001821066 |
|---|
| Protein GI | 182416000 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.582815 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATGC TGCTCTCGAC CGTTTGCTTC ACCGCGAACG TCCTGCTCAT CCGCGCCCTC
GGCGAATTCG CCACCGTCAA CGTCTGGCTG ATCAGCTGCA CGCGCTTCGT CGTGGGCCTC
GTGATGATCC TCGCCCTCTA CCGACAGGAA TTCCAGCCGC GCCACCTTTA CCAGAATCGT
CAGCTCATCA GTCGCGGACT CGCCGGCGGC ATCGGCGTCT ACGCCTATTA CCTGACGGTG
ATCCACATCG GGCCCGGTCG GGCAACGTTC ATCAACAATA CCTACGTGAT CTTCGGCGCC
TTGCTCGCCG TCTGGATGCT GGGCGAACGC TTCACCGCTG CTCGCGCCAC CGGCAGCACG
ATGGCACTCG GCGGACTTGC GCTGCTCACG AACCCCTTCG CCGCCGGCGC GGTTACCAGC
ATCTACGACC TGCTCGCGAT TGGCGGCGCG TTCCTGTCGG CCTACATCGT CGTGACGATC
CGTCAGCTTC ACGCATCCGA GCACACTTCG ACCATCTTCG CCGCCCAATG CGTTTACGGG
CTCCTCGTGT GCTCGGTGCC CGCCGCGCTC CACCCGGAGC CGATCGCGCC GCTGGCATGG
GCGGTGATGC TTGGCGCCGG GATCTGCGCC GGCGCGGGTC AGCTCGCGAT GACCCGTGCG
TTCCGCGAGT TGCCCGTCGC CGAAGGTTCG TTGCTGCAAA TGATCGTGCC CGTCGGCATC
GCCCTTGGCG GCTTCGCCTT GTTCGGCGAA CATTTCACGC GGCACGAACT GCTGGGCGCC
GCGCTGATCC TCGGCGGCAC CACCTACACC TCACTGCGGC GGTGA
|
|---|
| Protein sequence | MLMLLSTVCF TANVLLIRAL GEFATVNVWL ISCTRFVVGL VMILALYRQE FQPRHLYQNR
QLISRGLAGG IGVYAYYLTV IHIGPGRATF INNTYVIFGA LLAVWMLGER FTAARATGST
MALGGLALLT NPFAAGAVTS IYDLLAIGGA FLSAYIVVTI RQLHASEHTS TIFAAQCVYG
LLVCSVPAAL HPEPIAPLAW AVMLGAGICA GAGQLAMTRA FRELPVAEGS LLQMIVPVGI
ALGGFALFGE HFTRHELLGA ALILGGTTYT SLRR
|
|---|
| |