Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4074 |
Symbol | |
ID | 6204409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5278194 |
End bp | 5279066 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641693742 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001820948 |
Protein GI | 182415882 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.63505 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGACC AGCTGCGGCA GTCGCGGATC TATCGCGACT ACGAGCAGGC CTTCCGTGAG ACGACGGGGC TGCCCATCAA CCTGCGTGCG GTCGAGGCGT TCGACCTGCC GCACCACGGC GATCCGAAGG AAAACCCATT CTGTTCATTG ATGGCGAGTT CGAACCGATC CTGCTCCTCC TGCCTGCAGT TGCAGCGCAA GGTCGAGGAG GAGGCGCGGC TCGAGCCCAA GACGCTGAAA TGCTTCGCCG GGCTCTGCGA TTCCGCCGTG CCGGTGCGCG TCGGCGAGAA TCTTATCGCT TTCCTGCAGA CCGGTCAGAT TTTGCTGCAT CAGCCGACCC AGACCCAGTT CAAGCGCACC ACCCGGCAGT TGCTCCGCTG GGGCGCCACC GTGGACTTGC AGCAGCTCGA GGAGGCATTC TTCCAAACGC GGGTCGTCAC GAAGAAGCAG TATGAATCCA TCGTCCGGCT GCTGACGATC TTCGCCCAGC ACCTTTCGTC GCTCAGCAAC CAACTCTTGG TGAAACAGGA GACCGCCGAG TCGCCGGTGA TCACCCGCGC CCGCGTCTAC ATCACGGATC ACCAGAGCGA GGATCTCTCG CTTGGTCAGG TCGCGCAGGC GGTGAACATG AGCGCGTTCT ACTTCTGCAA GACGTTCAAG AAGTCGACCG GGATGACCTT CACCGACTAT CTCGCCCGCG TCCGCGTCGA GAAGGTGAAG AATCTGCTGC TCAATCCGCA CAAGCGCGTC AGCGAGGCGG CCTATGAGGC CGGATTCCAG TCGCTGTCCC AGTTTAACCG CGTTTTTCGG AAAATTGCCG GCGAGTCGCC CAGCCGCTAC CGCGAGCGCC TGCACGGCGC CGAGCACAAC TGA
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Protein sequence | MVDQLRQSRI YRDYEQAFRE TTGLPINLRA VEAFDLPHHG DPKENPFCSL MASSNRSCSS CLQLQRKVEE EARLEPKTLK CFAGLCDSAV PVRVGENLIA FLQTGQILLH QPTQTQFKRT TRQLLRWGAT VDLQQLEEAF FQTRVVTKKQ YESIVRLLTI FAQHLSSLSN QLLVKQETAE SPVITRARVY ITDHQSEDLS LGQVAQAVNM SAFYFCKTFK KSTGMTFTDY LARVRVEKVK NLLLNPHKRV SEAAYEAGFQ SLSQFNRVFR KIAGESPSRY RERLHGAEHN
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