Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4068 |
Symbol | |
ID | 6204513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5268944 |
End bp | 5271733 |
Gene Length | 2790 bp |
Protein Length | 929 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641693736 |
Product | hypothetical protein |
Protein accession | YP_001820942 |
Protein GI | 182415876 |
COG category | [S] Function unknown |
COG ID | [COG5368] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.83009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTTTTT GTTCTTCGCT CCCCTCTGCC CGATGGCCGC GCTGCGTTTT GGCAGCGATC CTCATCGCCA CGGGGGTGCT GGAACTTGCG GCACAGCCGC TGCGACACCC CAACCTTTCC GGCGCGCGGC CCGGCGCGAT CCTCAGTGAG GACGACCACG CCCTGCTCGA CGACATCCAG CGCGCGTCGT TTTTATATTT CGTCGAGCAG ACGCATCCCG AAACCGGTTT GGTCCGCGAC CGGGCGCGGG CGGACGGCTC GCCGAGCGAG GGCAAGGCCA GCATCGCGGC CTCGGGCTTC GCGCTGAGTT CGTGGGCGCT CGCGGCACAC CGCGGCTGGG TCGAGCGCGA CGAAGCGCTG GAGCGCGTGC GACTGATGCT GCGCTTCCTC GCCAACCAGG CGCCGCGGCG CCACGGATTT TTCTACCATT TCATGGAAAT GGAGACCGGC GCGCGCGCCT GGCAGTGCGA GATCTCCTCG ATCGACACCG GCCTCTTCCT CGCCGGCGCC ATCATCGCGC GGGAATACTT TCAGGATCCC GAGATCACGG ACCTGGTGAA CCGGCTGTAT CGCGACGTCG ACTGGCGCTG GTTTCTCAAC GGCGGCGACA CGGTCTCGAT GGGCTGGCAC GACGAGACCG GTTTCTCGCG CTACCGCTGG CGCATCTATT CGGAACACAT GATGATGAGT TTCCTGGCGA TGGGCGCGCC GGCCAATGCG CTCGAGCCAA GCTACTGGCA TGCGTGGAAG CGTCTGCCCG CGGGCACCTA CGCCGGCTAT CATTTCATGC AAGGGCCGCC GCTCTTCATC CACCAGTTCG CGCACGCCTA TGTGGACTTT CGCGACCGAC GCGACGCGTT TGTCGATTAT TACCAAAACT CCGTCCTCGC GACGCTCGCG CAGCGAAGGT TCTGCATGGA CCTGCGCACG GAGTTCTCCA GTTGGGGCGA GCGGCTGTGG GGGATAACCG CGTCCGACTC CGCGACGGGC TACAAAGCCT GGGGCGGTCC GCCGCGCACA ACCGCTTACA ACGCGCTCGA CGGCACGATC GTGCCGTGCG CCGCCGCCGG CTCCGTGCCG TTCGCCCCGT ATGAAACGAT GATGGTGCTG CGGCACATTC GCACCGTTTA CGGCGATCGG GTGTGGAAGC GCTACGGCTT CGTCGATGCG TTCAATCCGG AGACGGGCTG GGTCAATCCC GACGTGATCG GGATTGATCA GGGCATCACC ATTCTGCAGG CGGAAAACGC CCGCACGGGA TTTTTCTGGT CGTTGTTCAT GCGGGCGCCC GAGGTGCAGC GCGCGCTGTC CCGTTCCGGC TTCGTGTCGA AACGTCGGGC GTTCACCTGG CCCGAACGCG AGCAACTCCG CGAGCTCGCC GCCACCGCCT GGCAGTCGCT CGCCAACGAG CCCGTGACGC CCGACACGCT GGGGCTGCGC ATCACCGCCG TGCCCGCTGC GCAGGCGTTG GGCCTGGTGG ATGGCGCGTC GGCGCATCGG CAGCTGCGCG AGCTGTTGAG CGCCGCCGCG CCTCCCGCCA CCGATACCGC CGTGGCCGAA TACGCGGCGA GCCTCCTGAC GTTGCGCCAG GCGGTGCCAA GCCTCGCAGC GGACGCGACC CGGCTGCTCG AGGCGATCAA CTGGGAGCAG GTCACCATCA GCTCGACCAA GCTCGGCTCA GCGAGCCGGC TGGCGACGTT TCTCAAGATT GGCGCGGGTA AGAGCGACCC GAGCGCGTGG GACCGGCTGG TCCGCACTCC GGAGGTGCGC GGCATGGTCT TCGTGCTCTC CCCCGGCACC GTGGCGGACC AACTCCGGCC GTCGCTGTGG CTCGACGAAT CGAGCATCAT CACCGGCGCG TCCGGTGCGC AACTCGCCTA CTCGGCCGCA GTCGTGCCGC CGCCGGCCAA CGGCAACCCG CGACCGACAC CGGATCTGCT CACGACCGCG CTGTTACTCG ACAACTACCC CGCCGAGCTG CTCGCGCGGA TCAAGGACGC GCCGCCAGCG CCGGCCTGGA TCACCAGCGC CGCCCCGGCC GATCGCGCGA TCCTTCTCGC GACCGTGGCC AACGTACTCG TGCCCGAGAT CGTCCGCGAC TGGTTCCAGG CCGACGCGCT CGTGCGCGCC ACGCGCGCCA ACATCACCGA TTTCACGCAG GCGTCATTTG GCCAGAATAC CTCGCTCTAC TGGCGCTACG AACTCGCCGG TCCCTTCGTG GAACCCGCGG AGCGCCGGGC CGTCGCGGTG CCCGCTTCCA CCCCGCGCGA GGCCTGGCAA TGGACCCGGA TCGCCGGACT GGAATTCAAG GACTCGCCCG CAGACGTGCG CCCCGACGAT CCGCTGCTCG AGCTGCGTTT CGCGTTCACC TGGGACAACG AAGCGCTGCA CTTCCACGCG GAAGCGATCG ACACGCCCGC GCCCAACCCG CCTGCACCCG AGCGCGAGGA AATCGTCGAG TTGCTGATCG ATCCCAAAGG CGACGGTCTC GTGTGGCGCG GCCCCGAGGA TTTTCACTTT GTGTTTCGCG GCTCGGGTGA AGCGATCGAG TGGAATCACA ATCGCGCCCC CGAGGCCCGC ATCGAGCGCA CGCCGCAGGG CTACACCGTC GAAGCCGACA TTCCGTGGTC GCTGCTCGGA CTCACCCCGC AGCCCGGGCT CGAACTCAAC CTCACGACCG CTGTCGCTCG CAACGGCCGC TACGAATGGG AACCCTCGCT CAAGTTGAAC TGGCGGTTCT TTCAGCGCCG CGACGAACGC TACGGCCTCG GCAAGGTGAA GCTGCAATGA
|
Protein sequence | MPFCSSLPSA RWPRCVLAAI LIATGVLELA AQPLRHPNLS GARPGAILSE DDHALLDDIQ RASFLYFVEQ THPETGLVRD RARADGSPSE GKASIAASGF ALSSWALAAH RGWVERDEAL ERVRLMLRFL ANQAPRRHGF FYHFMEMETG ARAWQCEISS IDTGLFLAGA IIAREYFQDP EITDLVNRLY RDVDWRWFLN GGDTVSMGWH DETGFSRYRW RIYSEHMMMS FLAMGAPANA LEPSYWHAWK RLPAGTYAGY HFMQGPPLFI HQFAHAYVDF RDRRDAFVDY YQNSVLATLA QRRFCMDLRT EFSSWGERLW GITASDSATG YKAWGGPPRT TAYNALDGTI VPCAAAGSVP FAPYETMMVL RHIRTVYGDR VWKRYGFVDA FNPETGWVNP DVIGIDQGIT ILQAENARTG FFWSLFMRAP EVQRALSRSG FVSKRRAFTW PEREQLRELA ATAWQSLANE PVTPDTLGLR ITAVPAAQAL GLVDGASAHR QLRELLSAAA PPATDTAVAE YAASLLTLRQ AVPSLAADAT RLLEAINWEQ VTISSTKLGS ASRLATFLKI GAGKSDPSAW DRLVRTPEVR GMVFVLSPGT VADQLRPSLW LDESSIITGA SGAQLAYSAA VVPPPANGNP RPTPDLLTTA LLLDNYPAEL LARIKDAPPA PAWITSAAPA DRAILLATVA NVLVPEIVRD WFQADALVRA TRANITDFTQ ASFGQNTSLY WRYELAGPFV EPAERRAVAV PASTPREAWQ WTRIAGLEFK DSPADVRPDD PLLELRFAFT WDNEALHFHA EAIDTPAPNP PAPEREEIVE LLIDPKGDGL VWRGPEDFHF VFRGSGEAIE WNHNRAPEAR IERTPQGYTV EADIPWSLLG LTPQPGLELN LTTAVARNGR YEWEPSLKLN WRFFQRRDER YGLGKVKLQ
|
| |