| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4028 |
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| Symbol | |
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| ID | 6204995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5225073 |
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| End bp | 5227613 |
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| Gene Length | 2541 bp |
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| Protein Length | 846 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641693696 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001820902 |
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| Protein GI | 182415836 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.118602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0390699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTGGGGCT ACCGGGCCGG CCGCGAGGCT GAAGCGAAAC AGATCGAAGC CGAATTTGAT
CGCCGGGCCG ACACCCGCGT CGCGCTCACC CGGCAGATCG TCGCTTACTA CCAGTCCGGA
CTCTATGCGC TGAAAAGCCT CTTCGAGGGC AGCGATGCGG TCACGCCGGA GGAGTTTCGC
GATGTCGCCG TCGATGTGAT GACGCGGCAT CCGGGTGTCT CCGCGCTGGA ATGGGTGCCG
GTGGTCCCGG CGGCGGAGCG GAACGAATTT GAAGCCGCGG TGAGCCGCGC GCTGGGACGA
CCGTTTCACA TCACGGAGCG CGGCGCGGAC GGGAGCATGG TCCGCGCGGC CGACCGGCCG
GAGTATTTTC CGGTTACCTA CGTTGAACCC GCCACCACCA ACGACCGGGT GCTCGGACTC
GACGTGCTGA CGGCGTTCAG CCGGCCGCAG CTCGAGCGGG CGCGGCGCAC CGCCCAGTTC
ACCATCACGC CGCGGTTCCA GCTCGTGCAG GGCGGCACCG GCGTGGTGAT GGCTTGGCCC
GTGTTCAACC GCGGCGTGGA CGAGACGACC GGGCGGTTGT GCCGCGGTTT CGTGCAAGGC
GTGTTCCGGA TCGACGAGAT GATGGAGCAC AGTCAGCTGC CGTTCCCGCC CGCGACGCTC
GACGAACTCT ACCTCGACGC CGGCGTGCAG GATGGCTACA GCCGTGTGCT CTACGCCCGC
TGGGGTGATG CCAATCCGCC GAGTGCTCCG CTCGCCGAGA GCGACATGCG CCGCGGGCTT
TACCGCGAGT TCCCCATCGA CCTCGGCGGC CGGAAATGGC TCGCGCTTTA TCGTCCGCCC
GCCGCGTGGC TGGCGGAGCA AGACACGCAT CAGCCCGAGC GCTGGCTCGT CACCAATCTG
CTGATCGTCG CGCTGCTGGC GAGTCTCGTC ACCGTGATGG GCCGGCGGAC GATCTCCATC
CAGCGCGAGG TCGAGAGCCG CACCACCGAA CTCAACGAGA GCCGGCGCCA GCTCGCGAGC
CTGTTGCACG CGCTGCCGGG CGTCGCCTAC CGCTGCACCT GGCGCGAGCA CCTCGACGAG
GTCGTCTTCG TGAGCGAAGG CAGTCTGCAG CTCAGCGGCT ACGCCGCGGA GGAATTCATC
ACCCGGCAGG TCTTTTTCCG CGATCTGATT CACCCGGAGG ATCTCGCGGT GGTGCGCGAG
CGGACTCGGG CCGCGTTGAC CGCGAAACAG GAGTTCGAAG TCGAATACCG GATCCGAACG
CGCACCGGCG AAACCAAATG GGTACTCTCC CGCGGTCGCG GCGTCTACAC CGCCGACGGC
CAACTGGCGT TCTACGAGGG CCTGATGGTC GACCTCACCG GCCAGCGTCA GGCCGAAGCC
GAAAAGATGG CGATGGAGCG GCGGCTGCTC GAAAGCCAGA AGCTCGAGAG CCTCGGACTC
CTCGCCGGCG GGATCGCGCA CGATTTCAAC AACATCCTCA CCGGCATTCT CGGCCACGCC
AATCTCGCCC GCTGCGCCCC TGCGAGCGAA ACCGAGCTCG TCGAACATCT CCGGCAGATC
GAGGCCGGCG CCGCGCGCGC CGCGGAGTTG TGCCAGCAAA TGCTCGCCTT CTCCGGCCGC
GGCCGGTTCG TCACCGAGAC GGTCGATCTG AACCGGATCG TCCGCGATAC GCTCCCGTTG
CTGCAAGGTT CGCTGCCCGT GCGCGCCCGG CTGCAGCTCG CGCTGGCGCC GGAACCGGTG
CTCGTCACCG GCGACGCCAC GCAATTCCGG CAAATCGCGA TGAACCTCAT CCTCAACGCC
GGCGAAGCGC TCCCCCCCGC CGGCGGACAG GTCGCGGTGC GCAGCGGGCG CCGCGCCTTC
GATGCCACCT TCCTCGCCGG CGTTCGCGGC CAAAACAACC TGGCGGCCGG CGACTACGTC
TTTCTCGAGG TGCACGACAC CGGTTGCGGC ATGACGCCGG AGACGATCGC GAAGATTTTC
GATCCGTTCT TCACCACCAA GTTCACCGGC CGTGGCCTGG GGCTCGCCGC CGTGCTCGGG
ATCGTCCGCG GCCACGCGGG CGGGCTGCGC GTCGACAGCG AGCCCGGCAA AGGCTCGATC
TTCACGCTGC TCCTGCCCCC CGCCGCGAAC ACCCAGCTCA CCGCGGTGCG CCCGGGTACC
GCGACGCCCT GGCGGACCAG CGGTCGCGTG CTCGTCGTCG ATGACGAAAT CTCCGTTCGC
GAGATCGCCG CCCGGATGCT CAGCTCGTTC GGTTTCACCG TCGTCACGGC CAGCGACGGC
GTCGACGGTC TGCGGCAGTT CCGCGCCAGC CCCCGGTCGT TCGATTTCGT GTTCCTCGAT
TTGACGATGC CCGGGCTCGA CGGGATCGAA ACGTTGACCG CGTTGCGCGC CACCGCCGCC
GACATTCGCG TGATGCTGGT CAGCGGATAC AGCGAAAACG AGCAGATCGC ACAACTGGGC
AAGGACGGCC GGCTCGTGTT CCTGCAAAAG CCCTTCGCGC GCGCCCGGCT GGAGCAGAAG
CTGAAGGAAC TGCTCGCCTG A
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| Protein sequence | MWGYRAGREA EAKQIEAEFD RRADTRVALT RQIVAYYQSG LYALKSLFEG SDAVTPEEFR
DVAVDVMTRH PGVSALEWVP VVPAAERNEF EAAVSRALGR PFHITERGAD GSMVRAADRP
EYFPVTYVEP ATTNDRVLGL DVLTAFSRPQ LERARRTAQF TITPRFQLVQ GGTGVVMAWP
VFNRGVDETT GRLCRGFVQG VFRIDEMMEH SQLPFPPATL DELYLDAGVQ DGYSRVLYAR
WGDANPPSAP LAESDMRRGL YREFPIDLGG RKWLALYRPP AAWLAEQDTH QPERWLVTNL
LIVALLASLV TVMGRRTISI QREVESRTTE LNESRRQLAS LLHALPGVAY RCTWREHLDE
VVFVSEGSLQ LSGYAAEEFI TRQVFFRDLI HPEDLAVVRE RTRAALTAKQ EFEVEYRIRT
RTGETKWVLS RGRGVYTADG QLAFYEGLMV DLTGQRQAEA EKMAMERRLL ESQKLESLGL
LAGGIAHDFN NILTGILGHA NLARCAPASE TELVEHLRQI EAGAARAAEL CQQMLAFSGR
GRFVTETVDL NRIVRDTLPL LQGSLPVRAR LQLALAPEPV LVTGDATQFR QIAMNLILNA
GEALPPAGGQ VAVRSGRRAF DATFLAGVRG QNNLAAGDYV FLEVHDTGCG MTPETIAKIF
DPFFTTKFTG RGLGLAAVLG IVRGHAGGLR VDSEPGKGSI FTLLLPPAAN TQLTAVRPGT
ATPWRTSGRV LVVDDEISVR EIAARMLSSF GFTVVTASDG VDGLRQFRAS PRSFDFVFLD
LTMPGLDGIE TLTALRATAA DIRVMLVSGY SENEQIAQLG KDGRLVFLQK PFARARLEQK
LKELLA
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