| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4024 |
|---|
| Symbol | |
|---|
| ID | 6205082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 5220791 |
|---|
| End bp | 5222083 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641693692 |
|---|
| Product | phosphoribosylamine--glycine ligase |
|---|
| Protein accession | YP_001820898 |
|---|
| Protein GI | 182415832 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0151] Phosphoribosylamine-glycine ligase |
|---|
| TIGRFAM ID | [TIGR00877] phosphoribosylamine--glycine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.197328 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0741894 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCCTTC CCCGCTCCGT TCTCGTCGTT GGTTCCGGCG GTCGCGAACA CGCCCTCGTG
CTCGCGCTCG CCAAATCGCC CGCGGCGCCG CGGCTCCTCT GCGCGCCAGG CAATCCCGGC
ATCGCCGAAC TCGCCACGTG CATGCCCATC GCCGCCGATG AGGTCGCCGG CCTGATCGCG
CTGGCGCAGC GCGAGCACAT CGAGTTCGTC GTCGTCGGCC CCGAGGTGCC GCTGGCGCTC
GGGCTCGTCG ACGAACTCAC GAAAGTCGGC ATTCCCGCCT ACGGCCCGAA AGCCGACGGC
GCGCGGCTCG AAGCATCGAA AATCTACACC AAGGAGATTC TCCAGAAATA CGGCATCCCA
ACCGCACCCG CAGCGTTCTT CACCGAACCT GAGCCGGCGA TCGCCTACCT CCGCGCGCGT
CCCGCCCCGA TCGTGGTGAA AGCCGACGGA CTCGCGGCCG GCAAGGGCGT GGTGGTCGCC
GCCACGCACG CCGAAGCCGA GGCCGCCGTC CACTCGTTGC TCGCGCTCAC CCCGCAATCA
AAAATCGCCA ATCAGAAATC GAAAATCCTC CTTGAGGATT GTCTCGTCGG TGAAGAAACC
TCGATCCTCG TTGTCGTCTC GGGTCGCGAC TACGTCGTGC TGCCCACGTC GCAGGACCAC
AAGCGCGTCG GCGAAGGCGA CACCGGTCCC AATACCGGCG GCATGGGCAC CTACTCGCCG
GCCGAGGTGG TCACGCCCGC GCTGCTCGCC CGCATCGACC GTGAAATCGT CCGCCCGTCG
GTGGACGCAA TCGCGGCAGA GGGCATCGAC TTTCGCGGCA CGCTTTTCAT CGGCATCATG
CTCACCGCGG ATGGCCCGAG CGTGCTGGAA TTCAACACCC GCTTCGGCGA TCCCGAAACA
CAGGTCGTGC TGCCGCGCAT CGAGAACGAC CTGCTCGGGC TCCTCTGGGC CGCGGCGAAA
GGTCAGCTCG CCGGCACGCG GCTGAAAATC AGCTCCGCCC ACGCGCTCTG CGTCGTCATC
GCCGCGAAGG GCTATCCCAA CAACTATCCG AAGGGCGACG CGATCACGCT GCCCAAGGCG
ATTCCCTGCT CGGTCTCGAT CCTCCACGCC GGCACCGCCC GCACGCCTGC CGGCCAGCTC
GTCACCCACG GCGGCCGTGT GCTCGGCGTG ACCGCGCTCG CACCGACGCT GCATCACGCC
GCGCTCGACG CCTACGCCGT GTGCGATGCG ATCCAGTGCG CGAGCAAGTA TTTCCGCCGT
GACATCGGCG CGCGCCAGCT GCTGCGCGGC TAA
|
|---|
| Protein sequence | MPLPRSVLVV GSGGREHALV LALAKSPAAP RLLCAPGNPG IAELATCMPI AADEVAGLIA
LAQREHIEFV VVGPEVPLAL GLVDELTKVG IPAYGPKADG ARLEASKIYT KEILQKYGIP
TAPAAFFTEP EPAIAYLRAR PAPIVVKADG LAAGKGVVVA ATHAEAEAAV HSLLALTPQS
KIANQKSKIL LEDCLVGEET SILVVVSGRD YVVLPTSQDH KRVGEGDTGP NTGGMGTYSP
AEVVTPALLA RIDREIVRPS VDAIAAEGID FRGTLFIGIM LTADGPSVLE FNTRFGDPET
QVVLPRIEND LLGLLWAAAK GQLAGTRLKI SSAHALCVVI AAKGYPNNYP KGDAITLPKA
IPCSVSILHA GTARTPAGQL VTHGGRVLGV TALAPTLHHA ALDAYAVCDA IQCASKYFRR
DIGARQLLRG
|
|---|
| |