| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4020 |
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| Symbol | |
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| ID | 6205161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 5215778 |
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| End bp | 5216323 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641693688 |
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| Product | shikimate kinase |
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| Protein accession | YP_001820894 |
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| Protein GI | 182415828 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.263055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.623088 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGCTG CGGACGTCAA CCTCTACCTC GTGGGCTTCA TGGGCACCGG CAAAACCACG
ATCGGTCGGG CGGTGGCGCA GCGGATCGGT TTCACGCTGA TCGACAGCGA TCAGGAGATC
GAGCGGCAGC AGGGCCGGCC GATCACGGAA ATCTTCACGC AGGACGGCGA GCCGGCATTT
CGCGCGCTTG AGCGCGCGTT CATCGAAAAC GGGCACCCGG CGGAGCGTGC CGTGGTGTCC
TGTGGCGGCG GGCTGATCGT GCCGGCGGGA ATGCTGGAGT TGCTGCAGAG CCGCGGCGTG
GTGATCTGCC TGCACGCGTC GATCGAAACC ATCCTCGCGC GGACGGCACG CCATCGGCAC
CGGCCGTTGC TCAACGTCGA AGATCCGGAC GCTCGCGTGC GGGCGCTCTA CGCGCAGCGC
GAGCCGATTT ACCGGCGCGC GGGCACGATG CTGCTGACCG ACAGTCGCAG TCTCAGCGAG
ATCACCGGGC ATGTCATCCG CACGTGGCGG CGCGAAGCCG CGGAATTCGT GCGCCGGCAT
TCATGA
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| Protein sequence | MTAADVNLYL VGFMGTGKTT IGRAVAQRIG FTLIDSDQEI ERQQGRPITE IFTQDGEPAF
RALERAFIEN GHPAERAVVS CGGGLIVPAG MLELLQSRGV VICLHASIET ILARTARHRH
RPLLNVEDPD ARVRALYAQR EPIYRRAGTM LLTDSRSLSE ITGHVIRTWR REAAEFVRRH
S
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