| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4012 |
|---|
| Symbol | |
|---|
| ID | 6205227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 5206548 |
|---|
| End bp | 5207759 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641693680 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001820886 |
|---|
| Protein GI | 182415820 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.787898 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCCGCTT CCGCGCCCGT CATCGCCTAT CTCTTCACCA CGTTTCCCAA ATCGACGGAG
ACGTTCCTCC AGCGCGAGAT CATCGCCATG CGCGAGCATG GCGTGACGTT GCAGCTGTAT
TCGCTGTGGG GTGGGGGCGA TTCGTTTCGC GGGCTGCCGG TCACGCGGTT CAACAAATGG
CGGCTGTTCA CGTTGCTCTG GTGGATTCCG TATGAGTCGT GGCGGCGGCC CGAAGTGCTG
CGGCAGCTGC TGCGCGGGCT ATGCACGCGC CGCGCGCCGT CGTGGCTGAA CTTTTGGGAG
AACATGCTCG GGGCGGGCTT CGCCTGTCTC TTCGCCCGCG AGTTTCGGTC CCGCCCACCG
GCGCTGGTCC ATGCGACGTG GGGCGGTGCG CCCGCGACGG CGGCGTGGCT GCTGTGGCGG
CTCGATGGAC ACCGGTTCAC CGCGGCGGCG CACGCCTACG ATATTTACGA GCATGGGGGC
GACTGGTGGT TGCGCGAAAA GCTCGCGGAG GCGGCGTTGA TTCACACCTC CACCGAGATG
GCGCGGCAGG CGCTCGTCGC GCGCGGCGTG CCGCCCGAGC GGATCCATTG CATCCGGCGC
GGACTGGATC GATTCCCCGA GCTGAAATCG CTGCGTGCGC ATCGTGATCC GCTGCACCTC
GTGTGCGTGG CGCGGCTGGT GGAGAAAAAG GGGCTCGCGC ACCAACTGCA GATCTACGCG
GCGCTGCACT CGGCCGGGAT CGCGTTCGAG GCGCACGTCG TCGGCGAAGG ACCGCTGCGC
GCTGAGTTGG AGCAACAGGC CGGACGCCTC GGCATCGCGG CCCAGGTGAC GTTCACCGGT
CACCTGCCGC AGCACGAGGT CTGGACGCAA CTCGCGTGGG CCGACGTACT CCTGCACACG
GGCGTGATCG CGCCCAGTGG CGACCGCGAC GGACTGCCCA ACGTCATCCC CGAAGCGATG
GCGATCGGCA CGCTGGTGGT GACTTCGCCC GCGGCGGCCA CGACGGAAGC CATCACCAAC
GGCGTCACGG GCCTCGTCGC TGCGGCCGAG GCCACCGAGG ATTGGGTGGC GGCGCTGCGA
CAGCTCCGCA CCGATGATGC GCTGGCGGAG CGGCTGCGCC ACGCAGCCCG ACGCTGGGTG
GAGGAGAATT TCAACGCGCA CGACAACGCC GGTCGGCTGC TCGCTCAGTT CCGCGCCGTG
CTGGGAACAT GA
|
|---|
| Protein sequence | MSASAPVIAY LFTTFPKSTE TFLQREIIAM REHGVTLQLY SLWGGGDSFR GLPVTRFNKW
RLFTLLWWIP YESWRRPEVL RQLLRGLCTR RAPSWLNFWE NMLGAGFACL FAREFRSRPP
ALVHATWGGA PATAAWLLWR LDGHRFTAAA HAYDIYEHGG DWWLREKLAE AALIHTSTEM
ARQALVARGV PPERIHCIRR GLDRFPELKS LRAHRDPLHL VCVARLVEKK GLAHQLQIYA
ALHSAGIAFE AHVVGEGPLR AELEQQAGRL GIAAQVTFTG HLPQHEVWTQ LAWADVLLHT
GVIAPSGDRD GLPNVIPEAM AIGTLVVTSP AAATTEAITN GVTGLVAAAE ATEDWVAALR
QLRTDDALAE RLRHAARRWV EENFNAHDNA GRLLAQFRAV LGT
|
|---|
| |