Gene Oter_4008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4008 
Symbol 
ID6205276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5202556 
End bp5203830 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content68% 
IMG OID641693676 
Producthypothetical protein 
Protein accessionYP_001820882 
Protein GI182415816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0182414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCCGGC GGCCCCTCGG CCTCCTCGCG TTGTGCCTCG CCGTCGCGCT CGGCGGTTGT 
GTCTGGGCGG CATGGGACAT GTTCGGCCCG CAGCGGCGTC CGATGCTGCA GGGCTGGGAC
GACAGCCACT ACTATGCGTG GCTGCCTTCC GTCCTTATCG ATCGCGATCT CGATTTCGCC
AATCAGCTCA TCGGCCACGG CACGTTGCCA GCGAGCGCCG AAGCCGAGGT GCTGGCGCAA
CCGCGCACGG CTACCGGGCT TCTGCCCAAC AAATATCCGC CCGGCTGGGC CTTCGGCAGC
CTGCCCTTTT TTCTCGTCGC GCACGCGCTC GCACCGCCCG ATGCGAGCGG CTACGAGCCG
GTCTACCTCA TGGCGGTGTG GCTTGGTCAA CTACTCTACG CCGCCGGCGG CCTGTGGTTG
GCCGTACAGA TCCTCGCGCG GTTCTTTCCG CTCCGCGTCG CCACTGTCGC CACGTGCGCC
AGCTGGCTCG CCAGTCCGCT GCTCTACTAT CAAAGTGCGC GGCTGTCGTT GAGCCACAGC
CAGGTGTTCG CGCTGGCGAT GCTCACGCTC TGGCTCGCGC TGCGCCTCTG GGATGGAGAT
CAGCGCGCAC GCCTCTGGCT GCTGCTCGGC TTCGCGTCCG CCCTGCTCGT CGTCACGCGC
AACGTCGCTG TGGTCTATCT CGCGTGGCCG GCGTGGGTGC TCGTGCGCCG GCTGCGCACA
GCATCCGCGG CCGGCTGGCT GCTCGCAGGC GCAGCCGCGC CGGTGCTCGT GCAGGTGCTG
GCCTGGAAAC TTCTCTACGG GTCGTGGCTG GTGTATTCCT ACGGCGGCGA AAAGTTCGAT
TTCGCGCAGC TGCATCTGGT CGACGTGCTG GCCTCGCCGA GACACGGCTG GTTTTACTGG
CACCCCCTCT TGGTAGGCGG CGTGGTTGCC TTTGCGGGTT GGGCGTGGCG CCGCAGCGAA
GGCCGGGGGT GGCTACTCTC CCTGGCCTTG ATCGTGGTGC TCAATGCCGC CTGGCCGACG
TGGTGGCTGG GCTCGTCGTT CGGACATCGC GGATTCGAGG TGGCGACGCT GTTCGCCGCG
GTGGGCCTTG CTACGATCCT GCAAGCGTGC CGCGACCGCC TCGGACTGCA GCGCGCGGTC
GCAAGCATCA TCGCGATCGC CATCATATGG AACCTCGCGC TGTTGGCTCT CTTTCTGACC
CACCGCATCC CGCGCGAAGG ACCGGTGACC TACGTCGAAA TGGCGCGTGC GCTCGCCAGC
TGGCCGGCGC CGTAG
 
Protein sequence
MSRRPLGLLA LCLAVALGGC VWAAWDMFGP QRRPMLQGWD DSHYYAWLPS VLIDRDLDFA 
NQLIGHGTLP ASAEAEVLAQ PRTATGLLPN KYPPGWAFGS LPFFLVAHAL APPDASGYEP
VYLMAVWLGQ LLYAAGGLWL AVQILARFFP LRVATVATCA SWLASPLLYY QSARLSLSHS
QVFALAMLTL WLALRLWDGD QRARLWLLLG FASALLVVTR NVAVVYLAWP AWVLVRRLRT
ASAAGWLLAG AAAPVLVQVL AWKLLYGSWL VYSYGGEKFD FAQLHLVDVL ASPRHGWFYW
HPLLVGGVVA FAGWAWRRSE GRGWLLSLAL IVVLNAAWPT WWLGSSFGHR GFEVATLFAA
VGLATILQAC RDRLGLQRAV ASIIAIAIIW NLALLALFLT HRIPREGPVT YVEMARALAS
WPAP