Gene Oter_4006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4006 
Symbol 
ID6205330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5200206 
End bp5201387 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content70% 
IMG OID641693674 
Productglycosyl transferase group 1 
Protein accessionYP_001820880 
Protein GI182415814 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.240057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTGC TCGATCTCAC GCACACCAGT CACACCCGCG CCCGCACGGG CATCCAGCGG 
GTGGCGCGTG CGCTCTGGCG GCAGCTCGGT GCGAACGCCA TGCCGGTCAC CCGTGATCCG
TTCCTCGGCG GCTGGCGGCC GCTCGAACCT TGGGAACTGG CCAATCTCGC CAGCACGCAG
GGGAGCGAAC GCCGCCATGC CCGATGGCCA TGGTCGGCGA AATGGCGCAG TCGGTTCCGT
CGCATCCTGC GGCGCAACGC CCCACACCTG CTGACGGGGA ACTTCACAGG CTCGATCGAG
CCAGAGCTGT TCAGCCCGGT CGTGGGCCGC GAGCTCCCGC GGGTGTTCGC CCGCGTGCGC
GGGCCGCGCG TCGCGCTGTT CCATGACGCG ATTTCTCTCC GGCTGCCGGA GCTGACGCCG
CCGGCAATGG TGGCCCGGCT TCCCGGCTAC TTGCACGAGC TGCTGCAGTT CGACGGAATC
GCCGCGATTT CGGAGGACTC CCGCGACTCC TTGCTCGGCT ATTGGCGCTG GCTCGGAGTT
CCGGATACGC CGCCGGTCAT CGCGCTGCCG CTGGGTGTCG ATCCCTCACC CGCGGGCGTC
GACCGTGCGC CGCCCTCGTC GGCCGCACCG CCGGTGATCC TCTCCGTCGG TACGCTCGAG
GGGCGGAAGA ACCACCTCGC GCTGTTCGCC GCCTGCGAGA TGCTCTGGGT CGCGGGTGTG
GCGTTTACGT TGCGGGTTAT CGGCCACGCT GATGCGCCCA CGGGCGGCGC CGCGCTCGAG
CGGATTCGCG CCCTGCAAGC GAGCGGCCGG CCTGTACGCT ACGACGGTCC CGCCGACGAC
CCGACCATTG CCGCGGCTTA CGATGAATGC GCGTTCACGG TTTATCCCTC GCTGGCTGAG
GGTTTCGGGC TGCCGGTGAT CGAAAGCCTC GCCCGCGGCC GGCCGTGCAT CTGCCTCGGC
CGGGGCGCCC TCGGCGAGAT CTCGCGTGCC GGCGGCTGTG TCCCACTCGA CAACGTCGAA
CCGCCGACGC TCGCCCAGGC GATCCGGCGG TTGCTGGAAT CGCCGAGCGA ACTCCAAGCG
TTGAGCGCCA CCGCCAGCGC ACGGCGGTTC AATGACTGGG CAACGTATAC CGCTGAGCTC
ACGGACTGGA TCGCCACGCT GCGCCGCCGC AATTCCGTCT AG
 
Protein sequence
MLLLDLTHTS HTRARTGIQR VARALWRQLG ANAMPVTRDP FLGGWRPLEP WELANLASTQ 
GSERRHARWP WSAKWRSRFR RILRRNAPHL LTGNFTGSIE PELFSPVVGR ELPRVFARVR
GPRVALFHDA ISLRLPELTP PAMVARLPGY LHELLQFDGI AAISEDSRDS LLGYWRWLGV
PDTPPVIALP LGVDPSPAGV DRAPPSSAAP PVILSVGTLE GRKNHLALFA ACEMLWVAGV
AFTLRVIGHA DAPTGGAALE RIRALQASGR PVRYDGPADD PTIAAAYDEC AFTVYPSLAE
GFGLPVIESL ARGRPCICLG RGALGEISRA GGCVPLDNVE PPTLAQAIRR LLESPSELQA
LSATASARRF NDWATYTAEL TDWIATLRRR NSV