Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4006 |
Symbol | |
ID | 6205330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5200206 |
End bp | 5201387 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641693674 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001820880 |
Protein GI | 182415814 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.240057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTGC TCGATCTCAC GCACACCAGT CACACCCGCG CCCGCACGGG CATCCAGCGG GTGGCGCGTG CGCTCTGGCG GCAGCTCGGT GCGAACGCCA TGCCGGTCAC CCGTGATCCG TTCCTCGGCG GCTGGCGGCC GCTCGAACCT TGGGAACTGG CCAATCTCGC CAGCACGCAG GGGAGCGAAC GCCGCCATGC CCGATGGCCA TGGTCGGCGA AATGGCGCAG TCGGTTCCGT CGCATCCTGC GGCGCAACGC CCCACACCTG CTGACGGGGA ACTTCACAGG CTCGATCGAG CCAGAGCTGT TCAGCCCGGT CGTGGGCCGC GAGCTCCCGC GGGTGTTCGC CCGCGTGCGC GGGCCGCGCG TCGCGCTGTT CCATGACGCG ATTTCTCTCC GGCTGCCGGA GCTGACGCCG CCGGCAATGG TGGCCCGGCT TCCCGGCTAC TTGCACGAGC TGCTGCAGTT CGACGGAATC GCCGCGATTT CGGAGGACTC CCGCGACTCC TTGCTCGGCT ATTGGCGCTG GCTCGGAGTT CCGGATACGC CGCCGGTCAT CGCGCTGCCG CTGGGTGTCG ATCCCTCACC CGCGGGCGTC GACCGTGCGC CGCCCTCGTC GGCCGCACCG CCGGTGATCC TCTCCGTCGG TACGCTCGAG GGGCGGAAGA ACCACCTCGC GCTGTTCGCC GCCTGCGAGA TGCTCTGGGT CGCGGGTGTG GCGTTTACGT TGCGGGTTAT CGGCCACGCT GATGCGCCCA CGGGCGGCGC CGCGCTCGAG CGGATTCGCG CCCTGCAAGC GAGCGGCCGG CCTGTACGCT ACGACGGTCC CGCCGACGAC CCGACCATTG CCGCGGCTTA CGATGAATGC GCGTTCACGG TTTATCCCTC GCTGGCTGAG GGTTTCGGGC TGCCGGTGAT CGAAAGCCTC GCCCGCGGCC GGCCGTGCAT CTGCCTCGGC CGGGGCGCCC TCGGCGAGAT CTCGCGTGCC GGCGGCTGTG TCCCACTCGA CAACGTCGAA CCGCCGACGC TCGCCCAGGC GATCCGGCGG TTGCTGGAAT CGCCGAGCGA ACTCCAAGCG TTGAGCGCCA CCGCCAGCGC ACGGCGGTTC AATGACTGGG CAACGTATAC CGCTGAGCTC ACGGACTGGA TCGCCACGCT GCGCCGCCGC AATTCCGTCT AG
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Protein sequence | MLLLDLTHTS HTRARTGIQR VARALWRQLG ANAMPVTRDP FLGGWRPLEP WELANLASTQ GSERRHARWP WSAKWRSRFR RILRRNAPHL LTGNFTGSIE PELFSPVVGR ELPRVFARVR GPRVALFHDA ISLRLPELTP PAMVARLPGY LHELLQFDGI AAISEDSRDS LLGYWRWLGV PDTPPVIALP LGVDPSPAGV DRAPPSSAAP PVILSVGTLE GRKNHLALFA ACEMLWVAGV AFTLRVIGHA DAPTGGAALE RIRALQASGR PVRYDGPADD PTIAAAYDEC AFTVYPSLAE GFGLPVIESL ARGRPCICLG RGALGEISRA GGCVPLDNVE PPTLAQAIRR LLESPSELQA LSATASARRF NDWATYTAEL TDWIATLRRR NSV
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