| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3968 |
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| Symbol | |
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| ID | 6205627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5152313 |
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| End bp | 5154496 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641693636 |
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| Product | hypothetical protein |
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| Protein accession | YP_001820842 |
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| Protein GI | 182415776 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0475594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCCG TGCAGTCACC GCCTGCGCCC GCGCAGTTGC AGCAGCAACA GCAGCTTTTC
AACAGCATCA CTGCCCGACT CACGCAGCTG GCGAAGGACC CGCCTGACCT GCCGGTCTAC
CTGCGCGCCC ATGCCGAGTG TGTGACCACC GCCTTTCGAC CGGTGGGTTT TGCTTACGAC
ATGATCAGCG GCCCGGCCTT TCATCGCGTG CTGCAGGGCA ACGTGGAATC GCTGGGGCTC
AAGGAGGCGC CGGAACAGGA CAATGCGTTC CAGCGCGCCC GTCGGCTCGC CGCGGATCAG
CGCAAGCCCG TGGTCCTGCC GCCTCACAGC CAGCACGGCA CGCCATCGCA GATCGGCATC
CCGGTCGCGG AATCACCCGC GCCGGACGAA TCGCCCGTGT TCAATCGTAC GCCCTTTGAA
CAGCTCTTCG TGCCGATTCC GCAGGGCAAC GCCTCCGCCG GCGTATTGCA CATCTGGTTT
CAACCGGGCA ATCCCAACGC CTCGCACGCG CGGCTCATGC TGCTGCGGCA GCTGTGCAAC
GAGATCGAAC TTTACCTGAA GACACGCCGC GCGCGCGATG CGTCCCAGGA GGTCACCCGC
ATCAGCACCT ACGCCCGTCT GCTGGAGGAG CTGACCGGCG ACATCGACGT GGATTCGGTG
TGCTGGAAAT TGGTCAACTA TGCGCGAGAA GCCGTTGCCT GCGACCGCGT GTGCTTGTTC
ACCGTCGCCC ATTACGATCG CGTTCACGAC ATCGGGGCCG ATATGTTCGA CCTCAGCTAC
GATTTCAAGC TCCAAGCCTG CAGCGGCCTG AAAAGACCGC ACCCGAAGAG CGAACAAGCC
GGGGTGCTGC AACGCGTCGC CCAGAAGCTG GCGGAGATGT CCCTCGCGAA ATCAGCAGCG
GAAAGTGACA ATGGTCCTGC CCCGCTGGCC GAGGCGCCCA CAGCCGCAGC CGCGCCAGCC
GGCGCTGCGC CGGTCCCCGA GCGGCCTCCC GGACCCGCGG CTCCCGCCCG GCAAGCCGGT
CCGATCAAGC CGAAGCTCAC GCTGATGATG CGTGATCCTT CTAAAATCGA TGCACGTCCG
GTCGAGGTGA ACGATTATTT CGAGGTGATG CCGATGAACT GGGCCACAGT CATCCCGCTG
TTCGACCGGG ATCAGCGCGT GTGCGGAATT CTCCTGTTCG AGGGCACCAA GCTCGAGGAG
CAGATTGCCG CGCTGCTCAA GCCCATGCTC GATCTCGCTG CGTCCGCCGG CAAGGCTCTC
GGCACCGCTC TCTACTGCAA CCAGCACCGT TCGATGCGGA TCGCCCGACG GCTCGTCGCG
ACGCGCCAGG CCTACGTGAA CACGCCAACC AAGCGGAAAT GGCTCCGCTT TGGACTGCCT
GCCCTGCTGT TCGTCGCCGT GCTCGCCTGC CCCATTCCGT ATTCGGTCAA GGGCGGAGCC
AGTGTGCTTC CCGTCACCCA AACCACCCTC CCGGCGCTGG TGAGCTCGCG ACTGCTGGAA
GTGCCGGTGC GCGAGGGTGA ATCGGTGACA CAGGGCCAGG TGCTCGCACG TTTCGATACC
CGGGACATTC AGCTTCAGCT GGTGCAAGCC GAGCAGGAAT ATGAACGCTC GCTGGTCGAA
AGCGACGCCG CCATGAACGC CGGCAACGAA GCCCAGATGC AGATCGCCCG GCTGAATGCC
GACAAGGCGG CGGCCATGGC CGAGAAACTC CGGCTCGATC TCTCCCGGGC GGTCGTTCGC
GCGCCGTTTG ACGGCATCGT GCTGGGGGCG CAAACGCTGT CCACCCGGGT CGGCGAGGTG
CTCCGGCTCG GCGAGCCGGC CCTGCATGTG GTCGATCCGC GCACTTGGCA GGTGAAGGCC
GTGCTCAAGG AGCGCGACCT GATCTTCCTC GAAAAACGGC TCAAAACGCA TGGGCCCGTT
CCCGCGGCGC TCCGCCTCGC CGCCAACCCC GCCCACAAAT ATCAGCTGCA GCTCGTCAAC
CGTTCCCAGC TCGCCTACGG TCTGGACACG TCCACCGGCG ACTATCAGTT CACCGTCGTG
GTGCCGTTGA ACGCCAAGTT GGACGATGCG GCATTCCTAA AATCGGGTTT CACTGGCCGG
ATGACGTTCG AAAGCGGCGT GCGCCCTGTC GCTTACGTGC TGTTCAAGGA CTTCGTGGAT
TTCCTGACGG TTCGCTTCTT CTGA
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| Protein sequence | MTPVQSPPAP AQLQQQQQLF NSITARLTQL AKDPPDLPVY LRAHAECVTT AFRPVGFAYD
MISGPAFHRV LQGNVESLGL KEAPEQDNAF QRARRLAADQ RKPVVLPPHS QHGTPSQIGI
PVAESPAPDE SPVFNRTPFE QLFVPIPQGN ASAGVLHIWF QPGNPNASHA RLMLLRQLCN
EIELYLKTRR ARDASQEVTR ISTYARLLEE LTGDIDVDSV CWKLVNYARE AVACDRVCLF
TVAHYDRVHD IGADMFDLSY DFKLQACSGL KRPHPKSEQA GVLQRVAQKL AEMSLAKSAA
ESDNGPAPLA EAPTAAAAPA GAAPVPERPP GPAAPARQAG PIKPKLTLMM RDPSKIDARP
VEVNDYFEVM PMNWATVIPL FDRDQRVCGI LLFEGTKLEE QIAALLKPML DLAASAGKAL
GTALYCNQHR SMRIARRLVA TRQAYVNTPT KRKWLRFGLP ALLFVAVLAC PIPYSVKGGA
SVLPVTQTTL PALVSSRLLE VPVREGESVT QGQVLARFDT RDIQLQLVQA EQEYERSLVE
SDAAMNAGNE AQMQIARLNA DKAAAMAEKL RLDLSRAVVR APFDGIVLGA QTLSTRVGEV
LRLGEPALHV VDPRTWQVKA VLKERDLIFL EKRLKTHGPV PAALRLAANP AHKYQLQLVN
RSQLAYGLDT STGDYQFTVV VPLNAKLDDA AFLKSGFTGR MTFESGVRPV AYVLFKDFVD
FLTVRFF
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