| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3904 |
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| Symbol | |
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| ID | 6207151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 5067947 |
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| End bp | 5068633 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641693572 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001820778 |
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| Protein GI | 182415712 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.164626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCG TGATCACCGG GGCGACGCGC GGGCTGGGCC GGGCGCTGGC GGAGGAGTTC
ATTCGCGGCG GGCACGCTGT GATCGGTTGC GGCCGCGGCG GCGAGGCGAT CTTCGACCTG
CGGATGGCGC ATCAGGCGCC GCACGATTTT TCCGCGGTGG ACGTGGCGCA AGACACGAAG
GTGGCGATCT GGGCGGCGAA AGTGCTCGAG AACGAGGCCG CGCCCGACCT GCTGATCAAC
AACGCGGGCG TGATGAACCG GCTGGCGCCG CTGTGGGAGA TTGAGGACCG CGAGTTCGCG
AAGGTGCTCG ACGTGAATGT GCGCGGCGTG GCGAACATGA TCCGGCATTT CGTGCCGGCG
ATGGTCGCGC GGAAGCAAGG CGTGATCGTG AATTTCAGCT CGGGTTGGGG GCGCAGCACG
TCGCCGCAGG TGGCGCCGTA TTGCGCGTCC AAGTTTGCCA TCGAAGGGCT GACGAAGGCG
CTGGCGCAGG AACTGCCGAA AGGCATGGCG GCGGTGGCGC TGAATCCCGG CGTGATCGAC
ACCGACATGC TCCGCTCGGC GTGGGGCGAG GATGCGGGGA CTTATCCGAA GGCCGAGGCG
TGGGCGAAGG TGGCCGCGCC ATTCCTGCTG CAACTCGGAG CGAAGGACAA CGGACAGTCG
CTGACGGTGG CGCCGTTCGA AGCGTAA
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| Protein sequence | MKIVITGATR GLGRALAEEF IRGGHAVIGC GRGGEAIFDL RMAHQAPHDF SAVDVAQDTK
VAIWAAKVLE NEAAPDLLIN NAGVMNRLAP LWEIEDREFA KVLDVNVRGV ANMIRHFVPA
MVARKQGVIV NFSSGWGRST SPQVAPYCAS KFAIEGLTKA LAQELPKGMA AVALNPGVID
TDMLRSAWGE DAGTYPKAEA WAKVAAPFLL QLGAKDNGQS LTVAPFEA
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