Gene Oter_3898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3898 
Symbol 
ID6206601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5061164 
End bp5062435 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content64% 
IMG OID641693566 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_001820772 
Protein GI182415706 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.122997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.375271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCGC TGGTGGTTCC GGCGGCCTTG GGCGCGCAAG CGATGTTCCG CGGTGATCCC 
GCGCACAGCG GCCGAAGCGG GGAGACCGGT CCAGCCACGT TGAAAGGCGT GAAATGGACC
GTGAAAACCG GGGGTCCCGT CGTGTCGTCG CCGGTGCTGG TCGACGGCAC GCTCTACGTG
GGAAGCGACG ATGGTTCGCT CTATGCCGTG GAGGCCGGGT CGGGGGCGAC AAAGTGGAAG
TTTGCGACCG AAGGTTATGT TCGTTCGACG CCCGCGATCG TCGACGGCAC GGCCTACTTT
GGCAGCTATG ACGGCTTCAT TTACGCGGTG GACGCGGCTA CCGGACAGTT GCGGTGGAAA
TTCGAGACGG CGGGCGAGCG AAAGTTTTCC GCGAAAGGCC TGCATGGCAG CCGCCCGAAG
CAGCAGGTCA TCGCCGACGC CTGGGACTGC TATTTGTCGT CGCCGACGGT CGTGGACGGG
CGCGTGCACG TCGGCAGCGG GGACGGTCAC GTCTATGCGC TCGACGCGCG AAGTGGGGAA
CTGCGGTGGA AATTCGCCAC GCAGGACGTC GTGCATGCTT CGCCGGCGGT CGTCGATGGC
GTGGTCTACG TGGGCAGCTG GGACACGTTT CTGTACGCGT TGGACGCGAC GAACGGGGCG
CTGAAATGGA AATTCAAAAC CGGCGAGGAT CCGGAGAACC ACAATCAGGA AGGCATTCAA
TCCTCGCCGA CGGTGGTGGA GGGCGTGGTG TATTTCGGCT GTCGCGATTT CCACCTTTAC
GCGGTGGAGG CGCAGACCGG GACACAGAGG TGGAAACACA AGATCACCTG GATCAACGCC
ACTCCGACGG TGCGCGACGG CCGGGTGTAT GCGTCGACCT CGATCCCCTC GATGTTCTTC
GCGCTCGATG CGCAGACCGG CGAGGAGGTT TATCGCGTGG AACTCGGCGC GCCGGCGTTC
TCTTCCCCGA CGCTGGCCGG TGATCTCGCG TTCGTGGGCT CGTTCAACGG CCGGCTCTAT
GCGGTGGATC TCGCCGGACG GAAGATCGCA TGGGTATACG AGACCGATGC GGCGAAGGCG
AACGTGCGTC AGGCGCTGAC CCCCGAGGGG CAGCTGAATT CTCCGGTGCT GTTTCCCTCG
CGCTTCTTCG AGAAGATGAC CGTGGCGGTG GATCATCTGC TGGCGTCCGG CGCCATCCTG
TCTTCGCCGG CGGTGGAGCA GGGGCGGGTC TATTTCGGCA GCGCTGACGG CGCCATTTAC
GCGCTCGAGT GA
 
Protein sequence
MLALVVPAAL GAQAMFRGDP AHSGRSGETG PATLKGVKWT VKTGGPVVSS PVLVDGTLYV 
GSDDGSLYAV EAGSGATKWK FATEGYVRST PAIVDGTAYF GSYDGFIYAV DAATGQLRWK
FETAGERKFS AKGLHGSRPK QQVIADAWDC YLSSPTVVDG RVHVGSGDGH VYALDARSGE
LRWKFATQDV VHASPAVVDG VVYVGSWDTF LYALDATNGA LKWKFKTGED PENHNQEGIQ
SSPTVVEGVV YFGCRDFHLY AVEAQTGTQR WKHKITWINA TPTVRDGRVY ASTSIPSMFF
ALDAQTGEEV YRVELGAPAF SSPTLAGDLA FVGSFNGRLY AVDLAGRKIA WVYETDAAKA
NVRQALTPEG QLNSPVLFPS RFFEKMTVAV DHLLASGAIL SSPAVEQGRV YFGSADGAIY
ALE