Gene Oter_3846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3846 
Symbol 
ID6206304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4999634 
End bp5000989 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content71% 
IMG OID641693513 
ProductFmu (Sun) domain-containing protein 
Protein accessionYP_001820720 
Protein GI182415654 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTCG CCGGCAGCCA GCAAAACACC CTTCTCGCGA TGCTCGCGCG GCTGCGCCCG 
CATTGGCGGC ACGACCGCAC ACTCCCCGGC CGCGTGCAGG CGCTGCTCGC CAGCGATCGC
CGGTTCGGAT CGCGCGACCG GCGGCTGTAT CGCGAGCTGA TCTACACCAC GCTGCGCTAC
CTGCCCTGGA TCGAACCCGA ACTCGAACGT GATGCCGAAC AGGCGGTGCG GCTGATCGCC
TGGCTCGCGG CAGACGCACC CGCCACCGCC CATTTTCGCC ACGAGCTCAT CGGCGAGTGG
CCGCCCTGCC CCGCGCCGCT CGCGGAGAAA GCCGCGATGC TGGCGCAGCG CGTGGGAGCG
GCCGACACAG CCGCCGGCGC TGGGCGCTTC GCGCCGGAAG CACTCCTGCC CCGCTGGTTC
CACGAGCACT GCGCTGACGC TTTTGCGCCG GTGCAGCTCG ATCCCCTGCT GGCGCGCGCG
CCGCTCTGGC TGCGACTGCA GACGGACGAG CCGCGCAGCG TGACCGCGGA ATTCGAACAA
CTCGGCTGGA CCGCGTGCAG CTCGGCCGTG CTGCCCGGCG CACTGCAATT ACTCGACGAA
GTCGATGTCA CGCGCACCGA CGCGTTTCAA AACGGCTTGA TCGAGGTTCA AGACCTCGGT
TCGCAACTTC TACTCGCGGC CGCCCAGGTC GCGGCGGGTG GCCACTGGCT GGACGCCTGT
GCCGGCGCCG GCGGCAAGAC CCTGCAACTC GCAGCGCTGC TCGGCCCCGG TGGCACGGTC
GACGCGCACG ATGTCCGCCG CGCGGCGCTG GACGAACTCG CGCTTCGCGC GCGGCGCGCC
GGGATCCCAC TGACCCGCTC GTCCAGCCGT TCCGATGTCG GGCGCGATAT TCCGATCCCC
GCGGGCGCAC CTGTATCTGA CCGTTCGTCC CCGCGGGCTG CGCCGAAGCG CCCCGCCGCA
ACGGTGCGCA TCCTGTCGAC GATCCCGGAG ACGCTCTACG ATGGCGTGCT CGTTGACGCG
CCCTGCAGCG GGTCCGGCAC GTGGCGCCGC GCACCGCACC TCAAGTGGAC GACCACGCCC
GCGCACATCG ACCAGGCCGC CGGCCGGCAG CGCGAGCTGC TCGAGCAGTT CGCCCAGCGC
GTGCGGCCGG GCGGCCGGCT GATCTACGCC ACGTGCTCGC TCAGCCGGCG TGAAAATCAG
GACGTGGTGG CGGGATTCCT CGCGAGCCGG CCGGAGTTCG CCGCGGAGCC ACCCCCGGCT
ACCTTCGGTG CGCCGGTCGA CGCGTTCGGG CTCACGCTGC TGCCGGGATT GCACAACACC
GACGGCTTTT TTGTGGCCTG TATGCGGCGC AACTGA
 
Protein sequence
MSLAGSQQNT LLAMLARLRP HWRHDRTLPG RVQALLASDR RFGSRDRRLY RELIYTTLRY 
LPWIEPELER DAEQAVRLIA WLAADAPATA HFRHELIGEW PPCPAPLAEK AAMLAQRVGA
ADTAAGAGRF APEALLPRWF HEHCADAFAP VQLDPLLARA PLWLRLQTDE PRSVTAEFEQ
LGWTACSSAV LPGALQLLDE VDVTRTDAFQ NGLIEVQDLG SQLLLAAAQV AAGGHWLDAC
AGAGGKTLQL AALLGPGGTV DAHDVRRAAL DELALRARRA GIPLTRSSSR SDVGRDIPIP
AGAPVSDRSS PRAAPKRPAA TVRILSTIPE TLYDGVLVDA PCSGSGTWRR APHLKWTTTP
AHIDQAAGRQ RELLEQFAQR VRPGGRLIYA TCSLSRRENQ DVVAGFLASR PEFAAEPPPA
TFGAPVDAFG LTLLPGLHNT DGFFVACMRR N