| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3831 |
|---|
| Symbol | |
|---|
| ID | 6206405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 4977429 |
|---|
| End bp | 4979093 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641693498 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001820705 |
|---|
| Protein GI | 182415639 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.839475 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.508219 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGGAG TGCTCGCGCG CGGCAGCCAT CGCTTGGCGA CCGTGAGCAC GGTGGCGGAG
GCTTGGAGTT TCATTCAGCG CAATGTGGCG GTCGACCTCG TCTTCCTGGA ACTGAAATTG
GAGGGCGAAA ACGGCATCGG GCTGCTGCAG CGGTTGCGGG CCGATTGTTT TCTCAAGGTG
ATACCGGTCG TGATCTACAC CGCCGCGGGC GATCGCGACG TGGTCCGTCA GGCGATGCAA
CTCGGTGTCC AGAATTTTTT GGTGAAGCCG TATCGCGACG ACTACATCCT GGCCGAGGTG
GGCAAAGCGC TCGCGAATCC GTGGCGCAAC CAGCACTTCG AGGAGGAAAA ATCCTTCTGC
GCGATGACCG GCCTGACGCC GGACGGGTTG CGCGCGGCGC TCAAGGAAGT GCACGCCTCC
TTGCAGAACA TCGGGCCGGA GCTGCTCGAA CACATCAAGG GGGAGAACGC GCCAGGCGCG
ATCGGCACGA TCGAGAACAC CACCACCAAG GGAGAGGCGG CGGGCGCGTG GGGCATCGTG
GAGCTGCTCA ACGAGGTGAA GGGCCTCGTC GAGCAGGGGC TGTGGCCCGC GGCGGGCGGA
GCGCTGAGCC AGCTGGGCTT CGCGGAGCGA TTGATTTTCG CGCATCTAAA TCCGGCGGTG
GTCCCGGAAG ATTTCGTCTC GCCCGAGGAA CGCGCGAAAG CGGAGGAGGC GCGGGCGCGC
GCGGTGTGGT TCAATGCGGA GGCGGAGCAG CGCGTGCCGG TGGTCGCCTG GCCGCAACTA
CAGCAGCAGC TCGACGGACT GAAGGGTTGC CCGGTGGTCG ATTCCGTGGC GGCGGCGTTC
CAGATGGCGG CGACCGGACA TCCTTCGTCG CTCGCGCCGC TGATGGACAT TGCGGAGAAG
GATCCGGGGC TGTCGGCCCA GCTGATCGTC GCGGCGAACC AGGTGCGCAA GGGCGAGAAC
GAACCCGACC ACGAGCCGGT GGAGAATCCG CGAATCTGCG TAGGGCTGCT CGGTGAGATC
AGGCTGGCGG CGATGGCCAG TTCGCTCGTT CGCGTGGACG AACGCTACAT GGACATGCCG
CCGTGCAGCT GGACAAGTTT CTGGATGTTC CAGGTCGGCG TGGCGCGGAT GGCGCGTTAC
ACCTGCCGGT ACCTGGAATT TCACAGCTTG GAATCGCGCG CCTACGCCGC GGGGCTGCTC
CACGACATCG GCAAGCTCCT GCTGCTGCGA CTGCACCCTT ACGGCTTTCA GGCGATCGTC
GATTTCGCGC GACGGCGGTC CGTGCCGATC GCGGCGGCGG AGAAATTCTT TCTCGGCTGC
ACCACCGCGG AGATGGGGGC GTATTTCGCC GAGAAACGCG AGTTTCCGGC GAGCTACGGG
GTGGTGATGC GTTTCGTCGA AACCCCCGAA GCCGCCACCG AGGACGCGGT GCTCGTGGCG
AGCGTATCGC TCGCGCGCGA TCTCTGCCGG CAAAATCGCG TGGGCTGGAG CGGTGATCCG
AACGTCGGTG GAGTGAAACC GATTGCGGAA ACCGCCGGCT GGCAGGTGCT CAGCGGGCGC
GTTTTCCCGA GTTTCAATTT GCAGAAATTC GAGACCGAGG CCCACGCGGA ATGTCGGCAG
CTCAAGCGCG AGCTGCACGG ACAGGTGCAC CTACCGCAGC TGTAG
|
|---|
| Protein sequence | MRGVLARGSH RLATVSTVAE AWSFIQRNVA VDLVFLELKL EGENGIGLLQ RLRADCFLKV
IPVVIYTAAG DRDVVRQAMQ LGVQNFLVKP YRDDYILAEV GKALANPWRN QHFEEEKSFC
AMTGLTPDGL RAALKEVHAS LQNIGPELLE HIKGENAPGA IGTIENTTTK GEAAGAWGIV
ELLNEVKGLV EQGLWPAAGG ALSQLGFAER LIFAHLNPAV VPEDFVSPEE RAKAEEARAR
AVWFNAEAEQ RVPVVAWPQL QQQLDGLKGC PVVDSVAAAF QMAATGHPSS LAPLMDIAEK
DPGLSAQLIV AANQVRKGEN EPDHEPVENP RICVGLLGEI RLAAMASSLV RVDERYMDMP
PCSWTSFWMF QVGVARMARY TCRYLEFHSL ESRAYAAGLL HDIGKLLLLR LHPYGFQAIV
DFARRRSVPI AAAEKFFLGC TTAEMGAYFA EKREFPASYG VVMRFVETPE AATEDAVLVA
SVSLARDLCR QNRVGWSGDP NVGGVKPIAE TAGWQVLSGR VFPSFNLQKF ETEAHAECRQ
LKRELHGQVH LPQL
|
|---|
| |