| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3719 |
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| Symbol | |
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| ID | 6205801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4837015 |
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| End bp | 4838628 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641693385 |
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| Product | exo-poly-alpha-D-galacturonosidase precursor |
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| Protein accession | YP_001820594 |
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| Protein GI | 182415528 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGGTGC GCGATTTCGG CGCGACCGGC GATGGCGTGA CACTCGACAC CGCGGCCATC
AACCGCGCGA TCACGGCGAC CGCGCAGGCG GGCGGCGGCG TCGTGGAGTT TCCCGCCGGC
CAGTATCTGA GCCACAGCAT CCGGCTGCAG AGTCATGTCG AACTCCGGCT GGAACCGGGG
GCGACGCTCA TTGCGGCCGA TCCCCCGGCG GTGGGCGAAG CGGGCGGTTA CGACGCGCCC
GAACCGAACG ACTGGTCGGA GTATCAGGAT TTCGGCCACT CGCACTGGCG CAACAGCCTG
ATCTGGGGCG AAGGCCTCGA AAACGTGTCG ATCACCGGGC CGGGCCGGAT CTACGGACGC
GGACTGAGCC GCGGCAACGG CCGCAAGGCG CTGCCGGTGG GCGAGACGTT CGCAGGGTTT
GATCCCGCGA AGCCGCCGGA TGTGCTCGAG GCGGACGGCG CGTTCGAGAT CGTGCCGCGG
CCGGAGCTCA AGCCGGGACC GTTCGGCTAT CCCAACGCGC GCGACCGACT GGCCGATGGC
GTGGGCAACA AGGCGATCGC GTTGAAAAAT TGCCGTAACG TGGTGCTGCG CGATTTCTCG
ATCCTGCACG GCGGACATTT TGGGATTCTC GCGACTGGCG TGGACAATCT CACGATCGAC
AACCTGATCA TCGACACCAA CCGCGACGGG ATGGACATCG ATGCCTGCAG CAATGTGCGG
ATCGCGAACT GCTCGGTGAA CTCGCCGTGG GACGACGGCA TCTGCCTGAA GTCGTCGCAC
GCGCTCGGAG TTGCGCGCCT GACCAAGAAC GTGACGATCA CGAACTGCTT CGTGAGCGGC
TACGACGAAG GGACGCTGCT CGACGGCACG CGGCAGCGAA AGAGCGTGCA GCGCGGCGGG
CCGATGGGCC GGATCAAGTT CGGCACGGAA GCGGGCGGCG GGTTCAGGAA CATCACGATT
TCGAATTGCG TGTTCGAATA TTGCCGCGGG TTCGCGCTCG AGCAGGTCGA CGGCGGCGTG
CTGGAAGATG TGGCCGTGAC GAACCTCACG ATGCGCGACA TCGCCAACGC GCCGATCTTC
ATCCGGCTCG GAGCGCGGTT CCGCAAGCCG GACACCACGT CAGGAGGCTG GGTGCAACGG
ATCCTCATCG ACAATGTGGT CGCCTACAAT GTGTCCGCCG ATCACGGCAT CATGCTCATG
GGCCTACCGG AGAGCGGTGG GTATGCGCGT GCCGTGGAGG ATGTGGTGCT GTCGAACATC
CAGATCCATT TCCGTGGCGG CGGCACGAAG GAGCAGGCGG CGCGGGTGGT GCCGGAGCAC
GAGAAGAGTT ATCCGGAGCC GTATGTGTTT GGCGTGATGC CGTCGTGGGG TGTGTTCGCT
CGGCACGTGA GCGGACTGGT GCTGCGCGGG GTGGACCTAC GAGTCATGAA ACCGGACGCG
CGACCGGCGG TCGTGCTCGA TGACGTGTGG AACTCGCAAT TGCTCGATGT GCAGCTGCAG
GGTGGGGGAA TACCGACGTG GTCGTTGACG AAGGTGAGCG GTCTCAAATC GCGTAATTGC
ACGTCACTGC CCGACGGTGA CCGCGAGGTG ATGGGGGCGA CCGAGCTGCG GTGA
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| Protein sequence | MSVRDFGATG DGVTLDTAAI NRAITATAQA GGGVVEFPAG QYLSHSIRLQ SHVELRLEPG
ATLIAADPPA VGEAGGYDAP EPNDWSEYQD FGHSHWRNSL IWGEGLENVS ITGPGRIYGR
GLSRGNGRKA LPVGETFAGF DPAKPPDVLE ADGAFEIVPR PELKPGPFGY PNARDRLADG
VGNKAIALKN CRNVVLRDFS ILHGGHFGIL ATGVDNLTID NLIIDTNRDG MDIDACSNVR
IANCSVNSPW DDGICLKSSH ALGVARLTKN VTITNCFVSG YDEGTLLDGT RQRKSVQRGG
PMGRIKFGTE AGGGFRNITI SNCVFEYCRG FALEQVDGGV LEDVAVTNLT MRDIANAPIF
IRLGARFRKP DTTSGGWVQR ILIDNVVAYN VSADHGIMLM GLPESGGYAR AVEDVVLSNI
QIHFRGGGTK EQAARVVPEH EKSYPEPYVF GVMPSWGVFA RHVSGLVLRG VDLRVMKPDA
RPAVVLDDVW NSQLLDVQLQ GGGIPTWSLT KVSGLKSRNC TSLPDGDREV MGATELR
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