| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3673 |
|---|
| Symbol | |
|---|
| ID | 6206327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 4769841 |
|---|
| End bp | 4776353 |
|---|
| Gene Length | 6513 bp |
|---|
| Protein Length | 2170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641693341 |
|---|
| Product | fibronectin type III domain-containing protein |
|---|
| Protein accession | YP_001820550 |
|---|
| Protein GI | 182415484 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3401] Fibronectin type 3 domain-containing protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.20402 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTACC GCCTGCTCGC CAGCTTGGTG ACCTCCCTGC TGCTCGCCGT CACCGCTTCC
GCTTACAATT TTTCGATCAG CACGCTGCAC GGCGTCTCGT TCGCCAGCGG CGTAACCTCG
CTGCAATTCG GCCCGGATCA GCGGCTCTAC GCGGCACAGG TGAGCGGCGA GATCCTGGTG
ATGACCGTGC AGCGACTTGG GCCGAACAAC TACCAGGTCA CGGCGACCGA GACGATCAAT
CTCGTCCGCG ACATTCCGAA CTACAACGAT GATGGTACCC GGGCCGCCAC GCTGACGACG
CGCCAGGTGA CGGGTATCCT GGTGGTGGGC ACCGCGAGCA ACCCGGTGAT CTACGTGACC
TCCAGCGACC CCCGGATCGG GGGTGGCAGC GGCGGCGTCA ACGATCTCAA CCTCGACACG
AACTCGGGCA TCATTTCCCG ACTGACCCGT ACGGGGGGCG TCTGGTCCAA GGTTGATCTC
GTCCGCGGGT TGCCGCGGTC GGAAGAGAAT CATGCCAGCA ACGGCATGCA GCTCGATGCG
GCGACCAACA CGCTCTACCT CGCGCAGGGC GGCAACACCA ATGCCGGTGG CCCCTCGAAC
AATTTCGCGT TCATGTGCGA AACCGCGCTC TCGGCCGCGA TTCTTTCCAT CGATCTCGAC
GCGATCAACG CGATGCCCGT CCAGACCGAC GCCTACGGGC AGCAATACCT CTACAACCTG
CCGACCGTCG ACGACCCGAA TCCCAGCCGG GGCCAGAACC CCGACGGCAG CGACGTCAAC
GATCCGTTCG GCGGCAACGA CGGCCTGAAC CAGGCGCGGC TCGTCGCGGA CGGCCCGGTG
CAGGTCTACT CGTCCGGCTA CCGCAACCCC TACGACCTCG TCATCACGCG CACGCCCGGC
GCGGAGGGGC GGATGTACGC GTGGGACAAC GGCGCCAACA ACGGCTGGGG CGGCTACCCC
AAGAACGAAG GCCCCGAGGG CAACGTCACC AACGAATACG TCGACGGCGA GCCCGGCACG
GTGAACAACA AGGACAACCT GCACGTGATC ACCGCCGGCT ACTACGCCGG GCACCCGAAT
CCGATCCGCG CGAACCCCGC GGGCGCCGGT TGGTTCCACT ACGATTCCAC GCAGCCTGCC
GGTTCCGAAA AGATTTTCTC GCTTACGCCG ACCACGGATT GGCCGCCAGT GCCGGTGGCG
ATGGCCAATC CGGTCGAAGG CGATTTTCGG CAGCCGGGCG TGAACGACGG CGCATTGATG
ACCTACACGG CCTCCACGAA TGGCCTCGCC GAATACATCG CGACCAATTT CTCCGGTGAA
ATGCGCGGCA ACCTCATCGC CGCGAGCTAC GACGGCAAGC TGCTCCGCAT CGCGCTCAGC
GCCGACGGCA CGACCGTGAC CAACGGCGTC GAGCCGCTCG CCAGCGGTTT CGGCAACCTC
CCGCTCGACG TCACCACGCC CGACCCGATC AACGGCGCGG CGTTCGTCGG CACCATTTGG
GTCAGCCATT ACGCGCCCGC GAAAATCAGC GTGCTCGAGC CGAGCGACTT CGACTCCCCC
GGCAGCGACA CGTGCACGGG CATCAACTCC GCCGCGGTCG ACGAGGATGG CGACGGCTAC
AGCAACGCCG ACGAGATCGC CAACGACTCC GATCCGTGCT CGGCCGCGAT CCGACCGGCG
GATGTCGATG GCGACCACAT TTCCGACCAG CTCGACACCG ACGACGACAA CGATGGCGTG
CCCGACACGC AGGACCCCTT CCCGATCGAT CCGCTCGACG GCAAGAGCGT GCCGCTGCCG
CTGCGCTACG ATCTCTTCAA TGAGACGGGC ATCGGCTTCT TCGGCGTCGG CATGACCGGC
CTGATGATGA ACCCCGGCCA GGACTACCTG CCGTTGATCA GTCCGGACAA CGCGATCGCC
GGCGGCACCG CGGGGTTGTT CACGCTCGCC GAGGTCGGCC CCGGCCGCGC GCTCGGGTCC
AGCAACAACC AGAAGGACGC CTACCAGTTC GCCTTCAACT CCGACGAATT CACCACGCCG
TACATCATCT CCTCGCGCCT TGGCGGACCG TTCTTCAACA GCAGTCCAAC CGGTCAGCAG
GCGCAGGGCA TCTATCTCGG CAATGGCGAT CAGGACAACT ACGTCTCCGT CGCGATTCAC
GGCAACGAGG GCGCGGGCGG GCTGCAGGTC GTCTATGAAA ACGACGGCAC GATCGTATCG
CAGGACCTCT ATCCGCTCGC CGGGCTCGCG GACCTCACGA CGATCGATCT GTATTTCACC
GTCGATCCCG TCGCCGCCAC GGTGCAGCCC GGCTATCGGC TCAGCGAAAG CGATCCGGTC
ACCGCGTTGG GCTCGCCGAT TGCCGTCGGC GGCGAGGTGC TGGCCGCGCT GATGGGCGCG
CGCCCGCTCG CCATCGGATT CTTCGCCACC ACCGGCGGCG GCGGCGCACC GACGTTCTCT
GCGACGTGGG ACTACTTCGA CATCGCGCCG ATCAACAACA CCGCGATCGC CAAGTTCACC
ATCGATCCGC CGGTCACCGA CATGGCGACC GCCAGCACCT ACACGGCCGG AGCCTTCAAG
ATTCAGAACA ACTCCACTGA CGGGCAGCAA ATCGAGAGCG TTTCCATCGA TCTGAGCACG
GCGATCTTCC CCGACATGGT GTTCGATCCG GCCGGCACCG CCGGCGATCC GGACCACAAG
GCTTTCCAGC CTAACACCTA TGCCGGCGGC GCAGCCGGCG CGGTCGGCAC GAACACCAAA
CCGCACAACG GCACGAGCGG CGAGGACGGC TACGATGGGC TCGACATCAC GTTCGGCGCC
TTCCCGCCCG GCGGCTCACT CGCCTTCTCG ATCGATGTCG ATCCAAACAA CGTGAAAGGT
GTCGCCGCGC CCGGGGAGAA CCACGCCGCC AGCGTCTCCG GCCTCGAACT CATCGGCAGC
ACCGTCGAGG TGTTCTTCAG CGACGGCAGC GTCCAGCGCT CGCGGCTCGG CCGGCTCGAG
AACACGCAGG ATGGCTCCTA TGCGTGGCTC CGCTCCGAAA AGCCGCCGAA GCCGGGACTC
ACCGCGCTCG GCAAGTCTTC GCCGTTCACC ACCGGTGAAC CGGAAACCCT TCGCGTCGCC
GGGCCGACCG GCTTCAATGT CACGCTGACC CGCATCGAAG GCGCGCTCTA CCTCGGTGGC
GTGCCCGGCG GTGGCTACGA TATCGATCCG TTCGAAGCCA ACACCGCCAT CGACATCGCC
GAGCAGACCG GCGTGATCCC CGCGGCAGGT TACCTCGATT TCACCGTCAC CGGCACCAAG
TCGAACGACG ACGGCGGCTA CAACTACGTC ACCGCCGTCC TGAGCAACAG CTCCGGCATC
AAGGGTCCGG CGTCGACTCC GGTCGTGTTC ATGTTCGACC CCAGCCTCAG CCCCGACACC
CAGCCGCCCA CCCAGCCGGG CGCACTCACG TTCAGCAACG TGACGCCCAA CAGTCTCACG
GTTACGTGGA CCGCCTCGAC GGACAACGTC GGTGTCACCG GTTATCGCGT TTCGCGCGAC
GGCGCGTTGA TCGCGACGGT CACCGGCCTC TCCTACAACG ACTCGTCGCT CGCGCCGGCG
ACCACCTATG ACTACTCGGT GGTCGCTATC GACAGCGCGG GCAACCTCTC GGCCCCACGC
GCCGCGAGCG TCACCACGCT CGAGGCGAGC GCGAACACGG TGGTTCGGAT CAACTGCGGC
GGCCCGACTT ACCTCGACGC GACCGGCAAC ACTTGGATCG CTGACACCTA CTACAACACC
GGCTTTGCCT CGACGGATTC CGCGACGGTG ACGGGCACCA CCCTCGGCCA GCTGTTCAAA
AGCTACCGCT GGGACGACAC GCCGTCACCG GAACTTCTGT ACACCATCCC GATCGCGAAT
GGTTCCTATG TCGTCCGACT TTATCTCGCG GAAACGTCCT CGAGCGCGAA GGCGCCGGGC
AAGCGCGTCT TCGACGTCGA TATCGAGGGC ACGCGCGCGT TCGAGGATGT CGATGTCTAC
GTCATGGCCG GCGGCGGCAA CAAGGCGCTG ATCCTCGAGG CCGCGACGAC GGTCAATGAC
GGCAACGTGC AGATCAAATT CCTCCACCAG GTCTTCCATC CGCGCATCTA CGCGATCGAG
GTGCTGCCGA CCTCGGGCCC GAGCGACACC GAACCGCCCA CCCAGCCCGG CGCGATCACC
TTCAGCGGAG TGACTTCGAG CAGCGTGACA CTGGACTGGA CCGGCTCGAC CGACGACGTG
GGCGTCACCG GTTATCGGAT CTCGCGCGAC GGCTCGGTCC TCACGACGGT GAGCAGCCTG
ACCTTCACCG ACTCGACGGT GAGTCCGGAA ACCGCCTACG ACTACTCCGT CGTGGCGCTC
GATGCGGCGG GCAACGCCTC GACCGCGAGC ACCGCATCGG TCACGACCCT GGACGCGCCG
CCGCCCGACG ACACGCAACC GCCGAGCCAG CCCGGCGTGC TCTCGTTCAC TGGCGTGACG
ACGAGCAGCG TCACCGTGAA CTGGGCGGCA TCGACCGACA ATGTCGGCGT GGCCGGCTAC
CGGATTTCGC GCAACGGCGT GGAACTGACC ACGGTCACGG GCCTGACGTT CACCGACTCG
ACCGTCGTCG CGAACACGAC CTACGACTAC TCGGTCGTGG CCTTCGACGC GGCGAACAAC
ACCTCGCCCG AGCGCACCGG CAGCGTGGCC ACGCCGCCGA GCGGCGGCGC CAGCACCGTG
ATCCGCGTCA ACGCAGGCGG CTCGAGCTAC GTCGACGGCG CCGGGAACAC CTGGTCGGCG
GACACTGGCT ACAACACCGG CGGCACCTAT TCGGTCTCCT CTTCGACGGC CATCGCCGGC
ACGACCGATG ACCCGCTGTT CCGCACAGAG CGCTATGATG CCTCGACCGC ACCGGAGCTC
ACCTACTCGT TCGCCGTGCC GAACGGAAAC TACCTTGTCC GTCTGCTCTT CGCCGAGAAC
TACGGCAGCG CCAAGGGCGT CGGCAAACGC GTCTTCGACG TGGATATCGA AGGCGCCCGG
GCCTTCGAAG ATGTGGACAT CTATGCGCAG GCGGGCGGCG GCAACAAGGC CCTGATTCTC
GAGCACACGA CCGCCGTCAC GGACGGTCAG CTCAACATCG GCTTCGTGCA CCAGGTCCAG
AATCCGAAGG TCAACGCGAT CGAGATCCTT TCGGTCGACG CGCCGGCGGA CACGCAACCG
CCCACGCAGC CCGGCGCGAT CACGTTCAGT GACGTGAGCT GGGACAGCGT CACGCTCAAT
TGGGGTGCGT CGACCGACAA CATCGGCGTC GCAGGATATC GGATTTCCCG CGACGGAACC
GAGCTCGCCA CGGTCAATGC GCTCACGTTC ACCGACTCGA CGGTCGCAGC GCAGACCGAC
TACGACTACA CCGTTGTCGC GCTCGATGCG GCCGGCAACG AATCCACCGC GCGCAACGCT
TCCGTCACCA CCACCGCCTC GCCCGATACG CAGCCGCCGT CCGCGCCGGG CGCGCTCGTC
TTCTCCGACG TCACGGCGAG CAGTCTCACC GTGAGCTGGA CGGCTGCGAC CGACAACGTC
GAGGTAACGG GCTACCGCGT GTCGCGCGAC GGCGTGCAAC TGGCGACCGT CACGACGCTG
TCGTTCGACG ACACCGGGCT CTCCGCCGCC ACGTCCTACA GTTACTCGGT CGAAGCGCTG
GACGCCGCCG GCAACGCGTC GCCGGCGAGC ACCGCCTCGG TCACGACGTC CACGGCGGCC
GATGCGCAGC CGCCTTCCGC GCCGGGCGCG CTTGTGTTCT CCAACGTGAC CGCGAGCAGC
CTGACCGTGA GTTGGACGGC TGCGACCGAC AACGTCGAGG TAACGGGCTA CCGCGTGTCG
CGCGACGGCG TGCAACTGGC GACCGTCACG ACGCTGTCGT TCGACGACAC CGGACTCTCC
GCCGCGACGT CCTACAGCTA CTCGGTCGAA GCGCTGGACG CCGCCGGCAA TGCCTCGGTG
GCGAGCACTG CGACGATATC GACCGCGTCG AGCGGGCCGA CGCTACCGAC GATTCGCGTG
AACGCCGGTG GCAGCAGCTA TGTCGACAGC GCCGGCAACA CGTGGTCGGC CGACCACGGC
TATAACACCG GCGGCAAATA TTCCGTCTCG GGCTCGACGA CGATCACGAA CACGAGCGAC
CCGACGCTCT TCCGCAGCGA GCGCTACGAC GCGAGCACCT CGCCGGAGCT CACCTATTCG
TTCACCGTGC CGAACGGCAC GTACGTCGTG CGGCTCTACT TTGCGGAAAA CTATGCCAGC
GCGAAAGGCG CCGGGCTGCG CGTGTTTGAC ATCGACATCG AGGGCGCACG CGCCTTCGAG
GATGTCGACA TCTTCGTGCA AGCCGGCGGA GCCAACCGAG CGATGATGTT GGAGAACACC
GTCACGGTCA CCGATGGACA ACTGAACATC GGTTTCGTGC ACCAGGTGCA AAATCCGAAG
ATCAACGCGA TCGAGATCCT GCCCGCGCCG TAG
|
|---|
| Protein sequence | MNYRLLASLV TSLLLAVTAS AYNFSISTLH GVSFASGVTS LQFGPDQRLY AAQVSGEILV
MTVQRLGPNN YQVTATETIN LVRDIPNYND DGTRAATLTT RQVTGILVVG TASNPVIYVT
SSDPRIGGGS GGVNDLNLDT NSGIISRLTR TGGVWSKVDL VRGLPRSEEN HASNGMQLDA
ATNTLYLAQG GNTNAGGPSN NFAFMCETAL SAAILSIDLD AINAMPVQTD AYGQQYLYNL
PTVDDPNPSR GQNPDGSDVN DPFGGNDGLN QARLVADGPV QVYSSGYRNP YDLVITRTPG
AEGRMYAWDN GANNGWGGYP KNEGPEGNVT NEYVDGEPGT VNNKDNLHVI TAGYYAGHPN
PIRANPAGAG WFHYDSTQPA GSEKIFSLTP TTDWPPVPVA MANPVEGDFR QPGVNDGALM
TYTASTNGLA EYIATNFSGE MRGNLIAASY DGKLLRIALS ADGTTVTNGV EPLASGFGNL
PLDVTTPDPI NGAAFVGTIW VSHYAPAKIS VLEPSDFDSP GSDTCTGINS AAVDEDGDGY
SNADEIANDS DPCSAAIRPA DVDGDHISDQ LDTDDDNDGV PDTQDPFPID PLDGKSVPLP
LRYDLFNETG IGFFGVGMTG LMMNPGQDYL PLISPDNAIA GGTAGLFTLA EVGPGRALGS
SNNQKDAYQF AFNSDEFTTP YIISSRLGGP FFNSSPTGQQ AQGIYLGNGD QDNYVSVAIH
GNEGAGGLQV VYENDGTIVS QDLYPLAGLA DLTTIDLYFT VDPVAATVQP GYRLSESDPV
TALGSPIAVG GEVLAALMGA RPLAIGFFAT TGGGGAPTFS ATWDYFDIAP INNTAIAKFT
IDPPVTDMAT ASTYTAGAFK IQNNSTDGQQ IESVSIDLST AIFPDMVFDP AGTAGDPDHK
AFQPNTYAGG AAGAVGTNTK PHNGTSGEDG YDGLDITFGA FPPGGSLAFS IDVDPNNVKG
VAAPGENHAA SVSGLELIGS TVEVFFSDGS VQRSRLGRLE NTQDGSYAWL RSEKPPKPGL
TALGKSSPFT TGEPETLRVA GPTGFNVTLT RIEGALYLGG VPGGGYDIDP FEANTAIDIA
EQTGVIPAAG YLDFTVTGTK SNDDGGYNYV TAVLSNSSGI KGPASTPVVF MFDPSLSPDT
QPPTQPGALT FSNVTPNSLT VTWTASTDNV GVTGYRVSRD GALIATVTGL SYNDSSLAPA
TTYDYSVVAI DSAGNLSAPR AASVTTLEAS ANTVVRINCG GPTYLDATGN TWIADTYYNT
GFASTDSATV TGTTLGQLFK SYRWDDTPSP ELLYTIPIAN GSYVVRLYLA ETSSSAKAPG
KRVFDVDIEG TRAFEDVDVY VMAGGGNKAL ILEAATTVND GNVQIKFLHQ VFHPRIYAIE
VLPTSGPSDT EPPTQPGAIT FSGVTSSSVT LDWTGSTDDV GVTGYRISRD GSVLTTVSSL
TFTDSTVSPE TAYDYSVVAL DAAGNASTAS TASVTTLDAP PPDDTQPPSQ PGVLSFTGVT
TSSVTVNWAA STDNVGVAGY RISRNGVELT TVTGLTFTDS TVVANTTYDY SVVAFDAANN
TSPERTGSVA TPPSGGASTV IRVNAGGSSY VDGAGNTWSA DTGYNTGGTY SVSSSTAIAG
TTDDPLFRTE RYDASTAPEL TYSFAVPNGN YLVRLLFAEN YGSAKGVGKR VFDVDIEGAR
AFEDVDIYAQ AGGGNKALIL EHTTAVTDGQ LNIGFVHQVQ NPKVNAIEIL SVDAPADTQP
PTQPGAITFS DVSWDSVTLN WGASTDNIGV AGYRISRDGT ELATVNALTF TDSTVAAQTD
YDYTVVALDA AGNESTARNA SVTTTASPDT QPPSAPGALV FSDVTASSLT VSWTAATDNV
EVTGYRVSRD GVQLATVTTL SFDDTGLSAA TSYSYSVEAL DAAGNASPAS TASVTTSTAA
DAQPPSAPGA LVFSNVTASS LTVSWTAATD NVEVTGYRVS RDGVQLATVT TLSFDDTGLS
AATSYSYSVE ALDAAGNASV ASTATISTAS SGPTLPTIRV NAGGSSYVDS AGNTWSADHG
YNTGGKYSVS GSTTITNTSD PTLFRSERYD ASTSPELTYS FTVPNGTYVV RLYFAENYAS
AKGAGLRVFD IDIEGARAFE DVDIFVQAGG ANRAMMLENT VTVTDGQLNI GFVHQVQNPK
INAIEILPAP
|
|---|
| |