| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3655 |
|---|
| Symbol | |
|---|
| ID | 6207277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 4744880 |
|---|
| End bp | 4745515 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641693323 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001820532 |
|---|
| Protein GI | 182415466 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.658752 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTTC ATGTCCTGCC CGCCGGGCCG ATCCGGACCA ACGCCTACTT GCTGACCGCG
CCGGAGCGCG GCGAGGCCGT GCTGATCGAC GCGCCCGCCG GCGTGTGGCT CGACGTCGAA
CCGATCCTGC AAAAGGAGAA GTGCCGACTG ACGGAACTCT GGATCACGCA TGGGCATTGG
GACCACACGC AAGGGGCGGC GGAGATCGTG CGGCAAACGG GGGCGAAGGT GCGGGCGCAT
TCGGACGACC GGCCGTTGCT GGAAACGCCG AAGGTCCAGG AAGCGTTCAT GGGAACGCGG
TTGGACGTGG AACCGGTTGG CGTCGACCGT TGGGTCGGGC AGGGCGAGCG GTTCGAGTCG
CTCGGGCAGC CCGTGGAGGT TCGCCACGTG CCCGGCCACT GCGCGGGCAA CGTGCTCTAT
TTCCTGCCGC GGGCGCAGGC GGCGTTCGTG GGCGATGCGC TGTTTGCCGG CAGCGTGGGC
CGCACGGACC TGCCGGGCGG GAGCTTTGAG ACGCTGGAAC ATTCGATCCG GCAGCAGATT
TACACGCTGC CGGAAGAGAC CGCGGTTTAT CCCGGCCATG GGGCGGACAC GACCGTCGGC
GCCGAGATGG CGACCAACCC TTATGTTTCG GGATGA
|
|---|
| Protein sequence | MNLHVLPAGP IRTNAYLLTA PERGEAVLID APAGVWLDVE PILQKEKCRL TELWITHGHW
DHTQGAAEIV RQTGAKVRAH SDDRPLLETP KVQEAFMGTR LDVEPVGVDR WVGQGERFES
LGQPVEVRHV PGHCAGNVLY FLPRAQAAFV GDALFAGSVG RTDLPGGSFE TLEHSIRQQI
YTLPEETAVY PGHGADTTVG AEMATNPYVS G
|
|---|
| |