Gene Oter_3650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3650 
Symbol 
ID6206494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4738606 
End bp4740159 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content64% 
IMG OID641693318 
Productmethionyl-tRNA synthetase 
Protein accessionYP_001820527 
Protein GI182415461 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0143] Methionyl-tRNA synthetase 
TIGRFAM ID[TIGR00398] methionyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.826271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCAT TCTACATCAC GACCGCCATC GACTACGTGA ACGGTTCGCC GCATCTGGGC 
CACGCCTACG AAAAGGTGCT GACGGACGTC ATTGCCCGGT TCCGGCGGCA GATGGGCGAC
CGCGTGCATT TCCTCACCGG CACCGACGAG CACGGCCAGA AAGTGCAAGC CAGTGCGCGC
AAGCTCGGGA TCCCGCCGCA GCAGTTCGCC GATCAGGTCA GCGCCGAGTT CCGGGCGCTG
TTGCCCAAGC TGAACATTTC GAACGACGAC TTCATCCGCA CGACGGAGGA GCGGCACAAG
CGCGTCGTGC GCGATGTGCT GCAGCGGCTG TTCGACAAGG GCGAAATCTA CAAGGCGGAA
TACAAGGGCT TCTACTCGAC GCGGCAGGAG CAGTTCTTGC AGGACAAGGA CCGCAACCCG
GACGGCTCGT GGCCGGAGAT TTTCGGCGAG GTGACCGAGA TCACCGAGTC GAACTACTTC
TTCAAGCTGC GCGCCTACCA GGACTGGCTG ATCGAGTATC TGACGCAGCA CGAGGATTTC
GTGTTCCCGC GCTACCGGCA GAAGCAGGTG CTGGAGTTCT TGAAGGAGCC GCTGAACGAC
CTCTGCATCT CGCGGCCGCG CGAGCGGCTG GAGTGGGGGA TCTCGCTGCC GTTCGATGAA
GGTTACGTCA CCTACGTGTG GTTCGACGCG CTGCTGAACT ATTACTCCGC CGTCGTCGAT
AAACCCGGCA CCTGGCCGGC GTATCACGTC ATCGGCAAGG ACATCCTCGT GCCGCCGCAT
GCCGTTTACT GGCCGATCAT GCTGCAGGCC GCGGGCATCG AACTGCCGCG CGGCATCATC
GCGCACGGCT GGTGGCTGCA GCGCGGCGCC AAGATGTCGA AGAGCACGGG CAACGCGCTC
AACCCGCTGG ATCTCGTGGG CGAGTTCGGC GCGGATGCGT TCCGCTATTT CCTGATGCGC
GAGATGAACG TGGGACAGGA CAGCGATTTC ACCCGCGAAC AGTTCCTGGT CCGCTACAAC
AGCGAACTGG CGAACAATCT CGGCAATCTG GTGAACCGCA CGCTCAACAT GACGACGCGG
TTCGCCGGCG GCGTGCTGCC GGCGCCGGAA GCGGGCGACG ACACCGAGCG CGAGCTGCGC
GCGCTGTGGG ACAAAACGCG CGACGAATGC CTTCCGCTCA ACGAGGAGTT CCAGTTTCAC
ACCGCGCTCG AGCGGGCGAT GACGTTCGTC ACCGCGACCA ACGCCTACAT CGAAAAACGC
GCGCCGTGGA AACTCGGCAA GTCCGCCGAA CCGCATGACC AGGCACTGCT GCGGACGTCA
CTCGCCACGA TGGCGGAGGC GCTCCGGCTC GCGGTCGCTT CGGTGCAGCA CGTGATACCG
GCTGCGGCCG AGAAGATCAA CGGCGTGCTC GGCTACACGC CTGGACCGGT GTGGCGCGAC
GAGCTCGTCT GGGGTACGAA GCTCACCGGT GCGAAGGTGG CGCCGGCACT GGTGCTGTTC
CCGCGGCCGA CGGCGGAGAA GCCCGAACAA TCGGGAAAAC CGGCGAAGTC ATAA
 
Protein sequence
MKSFYITTAI DYVNGSPHLG HAYEKVLTDV IARFRRQMGD RVHFLTGTDE HGQKVQASAR 
KLGIPPQQFA DQVSAEFRAL LPKLNISNDD FIRTTEERHK RVVRDVLQRL FDKGEIYKAE
YKGFYSTRQE QFLQDKDRNP DGSWPEIFGE VTEITESNYF FKLRAYQDWL IEYLTQHEDF
VFPRYRQKQV LEFLKEPLND LCISRPRERL EWGISLPFDE GYVTYVWFDA LLNYYSAVVD
KPGTWPAYHV IGKDILVPPH AVYWPIMLQA AGIELPRGII AHGWWLQRGA KMSKSTGNAL
NPLDLVGEFG ADAFRYFLMR EMNVGQDSDF TREQFLVRYN SELANNLGNL VNRTLNMTTR
FAGGVLPAPE AGDDTERELR ALWDKTRDEC LPLNEEFQFH TALERAMTFV TATNAYIEKR
APWKLGKSAE PHDQALLRTS LATMAEALRL AVASVQHVIP AAAEKINGVL GYTPGPVWRD
ELVWGTKLTG AKVAPALVLF PRPTAEKPEQ SGKPAKS