| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3571 |
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| Symbol | |
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| ID | 6206539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4647773 |
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| End bp | 4649878 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641693239 |
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| Product | PDZ/DHR/GLGF domain-containing protein |
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| Protein accession | YP_001820448 |
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| Protein GI | 182415382 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.226926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTATTTC AAGTCACTGC GGACGAAGTC ATGGATGCCT CGTCGTTGCG GAAGCTGCTG
AGCGGGTTGA TCGTGTGCGC GGTGTGGTCG GTCGCCGCCG CGGCGATCGG AGCCACGGGA
AAACCGACGG AAACCGCGGC GACCACGCCG ACGCATGATC CGATGCTCGC GAAGATTTTC
CCGTCGATCG TGCGGATCGA AGCGATCCGG CTGCGGCCCA GCGACGGCCG GCTGACCAAA
CAGTGGACCG CCGGCAGCGG CGTGGTGATC GCGGTCGAGG GCCGCGTGCT GACGAACGCG
CACGTGACGC AAGACGGAGA CTACTTCCGC TGCTACCTTT TCGATGGTTC GCACATCGAC
GCGAAGCTGC AGGGCCAGGA TCCGCTGACC GATCTGGCCG TGCTGCAGAT GGACCTGTCC
CAGCGCCCGA GCGGCGCGCC CGCACTGGTG GCGGCGACGT TTGGTGATTC GGATGCGCTG
CGCGCGGGCG ACACGGTGTT CGCGCTGGGC AGTCCGGGGT TTCTCTCGCA GTCGGTCACG
CGCGGCATCG TTTCGAATCC TTCGCTCGTG CTGCCGGAGC AAACCGCCGG GCGGATGGTG
CTGCGCGGGG AAAACGTGGG CACGCTCGTG CGCTGGATTT TGCATGACGC GCGAATCTTC
GGCGGCAACA GCGGCGGGCC GCTGGTGAAC GCCCGCGGCG AGATTGTCGG CATCAATGAG
CTCGGCGTGT TCAACTTGAG CGGAGCGATT CCCGGCAACC TCGCGCGCGC CGTGGCGGCG
CAGCTCGGGA AGAGCGGCCG GGTGACGCGC GGCTGGTCGG GCATCACGGT GCAGCCGCGA
CTCGAGGCGA ACGGCCGAGG CGCCGGCGTC ATCGTCGGCG ACGTGGCGGA GAACTCGCCG
GCGGCGGCAG CGGGCCTGCG TCCGGGCGAT TTGGTGACGG CCTGCGACGG CCAGCCGATC
GAAGGTGCGG AGGAAAAGGC GGTGGCGCAT TTCAACCGGC TCGAGATGAG CCGACTGCCG
GGCGACGTTT TCGCGATCGA CTTCACGCGC GAGGGCGCGG CGCAAACGAT TCGGCTCACG
CTGGCGGAAC GCCAGCCGGC GCAGGCCGAT GATGTCGAGA TCCGCGGCTG GGGCGCCGTG
GTGCGGGACC TGACGCGCGA ACTCGTGCGC GAACAGCGAC TGCCGGAAAC CGCCGGCGTG
TGGCTGGAAA ACGTGCGCCC GGCGGGGCCC TGCGGGCAGG CCGAGCCGAT CCTGCGGCGC
GAGGACGTGC TGCTGGCGGT GGATGGCAAG CCCGTCGCGA CCGTCGCGGA GTTGCGTGCG
TTGACCGACC GGTTGCTGGC TGCAGCGCCG AATCACCGGC GGACCGTGCT GGCCAGCGTG
CGCCGCGATG GAGCGGTGCT GAGTTCGGTC GTCGAGCTTC GCGAGACGAG TGATCACAAC
GTCACGCAGC AGGCGCGAAA GGCGTGGCTG GGGGCGGCGT CGCAGCCGCT GACACCGAAG
CTGGGCGACC GGCTCGGAAT CAAGGCGGAA GGCGGCGCGC GGCTGACGCG GATTTATCCG
GGCACGGAGG CCGAAAAGGC CGAGCTGAAA GTGGGCGACG TCGTGCTCGC GCTCGATGGC
GCGCCGGTCA CTGCGCGGCG GCCGGAGGAT ACGGACGTGC TGGCGCGACA GATCCGGCAG
TATCGCGCCG GGACGTCAGC GGTGTTCACG ATCTGGCGGG ACGGCCAGAC GCGGTCGTTG
CCGGTGCTGC TGGAGGCGCA GCCCACGCCG GCGGCCGAGA TGCCGTGGTG GGAAGACACC
GATTTGGAGT TCTCGGTGCA CGACATCGCG TTCGACGATC GCGTGCGGCT GCAACTTTCG
CGCGACGCGC AAGGCGTGCT CGTCGAGAGT GCGATGCCGG CAGGGTGGGC GGCGCTCGCC
GGGTTGCGCA GCGACGATGT GATCGAGAGC GCCAGCGGGC GGCCCGTCAC CAACGTCGCG
GAGCTGCGGA GCGAGCGGGA GCGCGCCGTG GCCGGCAAGG CCGATTGGTG GGTGCTGCTC
GTGCGCCGGG CGGGCCAGAC GCTTTTTGTG GAGATCAACC TGAAACCCGC CCACTCGAAA
TCATGA
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| Protein sequence | MVFQVTADEV MDASSLRKLL SGLIVCAVWS VAAAAIGATG KPTETAATTP THDPMLAKIF
PSIVRIEAIR LRPSDGRLTK QWTAGSGVVI AVEGRVLTNA HVTQDGDYFR CYLFDGSHID
AKLQGQDPLT DLAVLQMDLS QRPSGAPALV AATFGDSDAL RAGDTVFALG SPGFLSQSVT
RGIVSNPSLV LPEQTAGRMV LRGENVGTLV RWILHDARIF GGNSGGPLVN ARGEIVGINE
LGVFNLSGAI PGNLARAVAA QLGKSGRVTR GWSGITVQPR LEANGRGAGV IVGDVAENSP
AAAAGLRPGD LVTACDGQPI EGAEEKAVAH FNRLEMSRLP GDVFAIDFTR EGAAQTIRLT
LAERQPAQAD DVEIRGWGAV VRDLTRELVR EQRLPETAGV WLENVRPAGP CGQAEPILRR
EDVLLAVDGK PVATVAELRA LTDRLLAAAP NHRRTVLASV RRDGAVLSSV VELRETSDHN
VTQQARKAWL GAASQPLTPK LGDRLGIKAE GGARLTRIYP GTEAEKAELK VGDVVLALDG
APVTARRPED TDVLARQIRQ YRAGTSAVFT IWRDGQTRSL PVLLEAQPTP AAEMPWWEDT
DLEFSVHDIA FDDRVRLQLS RDAQGVLVES AMPAGWAALA GLRSDDVIES ASGRPVTNVA
ELRSERERAV AGKADWWVLL VRRAGQTLFV EINLKPAHSK S
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