| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3490 |
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| Symbol | |
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| ID | 6205683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4537946 |
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| End bp | 4540063 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641693157 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_001820367 |
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| Protein GI | 182415301 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.430681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAATA GCCGGCTCTG GCGGGTGCTC TGCGTCGCGC TTTGCGCGGG GTTGTTGCCT
GGATTGGCGC CGATCCTGGC CGCGGAACGG TCGCAGGAAC CGGCGAAGAT CGAGGTCAAC
GGCCTCGGCT GGCTGCGCAA CCGCGAGCAG CGGCGCGCGC TCGAACGCCT GCTGGGGGCC
GAACGAGGGG CGACGCTCGA CGCGGGCGCG ATCGAGGACG CCGAATTTCT GCTCATGTCC
GCGCTGGTCG AACAGGGGTT CCTGCACCCC GAGATCCAGG CGCGCATCAC CACTCCGGAG
GGCAGGGCGG AAACGCACCC GTTCGACGCG ACGCTGCAGT CCTCCCTGCC GCGATCGGTG
CGCGCGACCG AATTGAACTT GGACGTGAAG CGCGGCCGCC GGTACCGGTT CGACGAGGTG
CGCTTCCAAG GCCTGCACGC GGTGCCGGAC GAAGCTGCGC GGGAGTTCTT CCTCGGAGAG
CGCGTGCTCA TCCGCGGCGG CGCGGCCCAG GTCTATTCGC CGGCGCGCTT GCGCCGCTCG
GTCGAAGGGC TGCAAAACGA ACTGCGGCGA CTCGGCTATG CCGACGCCAC CGTGCGCACC
GACGACCTGC GCATCGATGA CCAAACGGGC GACGTCGACG TGACGGTGAT CGTGGACGAA
GGCGCGCGGT GGGAAGTACG CGACGTGCAG ACCGCCGGCG CGGCCGACGA GTTGACAACG
CTGTCGCTGG AGCGGTTCGA GCAGCACCCG TGGACGCACT ACCTCGAGCA GGATATCGCC
GAGGCGATTC GGAATCATTT CTACCAACGC GGTTATCCTG ACGTGCGCGT CCAAATGCGC
CGCGACGCGC GGCCGGCCGC GGAGGGCGTG AAGCCGGTGA CGGTGATCGC GACGATCGCA
CCCGGCGCGC GCGTCACGAT CGGACACGTG CGTTTCGAAG GCCTGCAAAA AACGGTGCCG
GCCGTCGTGG AGCGCCGCGT GCGGGCGACG CCCGGCGAAC CGCTCAACCC GCTGGCGCTC
GATCAGGCGC GGTTCCGGTT GGGGCGGCTC GGCGTCTTCG ACCGCGTGGA CGTGCGGTAT
GAGCCGAGTG AGGGTCCGGT GCGCGATCCG GTTTTCCGCG TGCAGGAGGG ACGCGAGCTC
GAGGCGAGTC TGCTCCTCGG CTACGGCAGC TACGAACAAC TGCGCGGCGG GATCGAGTTG
CGGCAGTTCA ACCTGTTCGG CCGCGCGCAC CAGAGCCGGT TGCTGCTGGT GCAGTCGATG
AAGAGCAGCC GCGGCGAGTA CAGCTACACC GTGCCCGAGC TGTTCGGCGA ATCGCTCGAC
GGCACCGGCC GCGTGTTCGG ACTTCAGCGG CAGGAGACCT CGTTTCTGCG GCAGGAATAC
GGCGCGAACT TTTCCGTCGC GGCACCGGTG CGCTGGCTGG GCGCCAACGC GACGCTCGGC
TACACGTTCC AATCGCTGCG TAATCAGGAC AACAACCTGG CCACGCGCAC GGCGGACGAG
CAGCAGGTGA CGGCGGCGAG CGTGGAACTC AATCTGGTGC GCGACCGGCG CGACAATCCG
TTGCGACCGC GGCGCGGGTA TCGCTGGTTT GTGCAAACGG AAACAGCGAG CCACTATCTC
GGCGGCACGG TGGATTACCA GCGGCTGGAG TTCGGCGGAT CGTGGCACCG TCCGTGGGGC
CGCGGCCGCT GGGTGCACCT GGGGCTGAAT CACGGCGCCA TCACGACGTT CGGGTCGCAG
AACAACGATT CGGACCTGCC GGTGAACAAG CGGTTCTTTC CCGGCGGCGA CAACAGCATC
CGCGGCTTTC GCGAAGGCGA GGCGGCTCCG CGCGGCGCGG ACGGGCGGTT CATCGGCGCC
AAAACCTATC TGTTGCTGAA TGCGGAGATC GAGCAGGCAC TGACGGCCAA ATGGTCGTTG
GTGGTTTTTG GCGACGCGCT CGGGATGGCC GTTCGGCTGG CCGACTATCC GTTCGCCGAA
CAGCTCTTCG CCGTCGGCGT GGGCGTCCGC TACCAGACGC TCATCGGCCC GTTGCGGATG
GAGTATGGCC GCAACCTCGA TCCCCGGCCG CGCGATCCCG GCGGCACGCT GCTGTTCTCG
GTCGGGTTCC CGTTCTAG
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| Protein sequence | MRNSRLWRVL CVALCAGLLP GLAPILAAER SQEPAKIEVN GLGWLRNREQ RRALERLLGA
ERGATLDAGA IEDAEFLLMS ALVEQGFLHP EIQARITTPE GRAETHPFDA TLQSSLPRSV
RATELNLDVK RGRRYRFDEV RFQGLHAVPD EAAREFFLGE RVLIRGGAAQ VYSPARLRRS
VEGLQNELRR LGYADATVRT DDLRIDDQTG DVDVTVIVDE GARWEVRDVQ TAGAADELTT
LSLERFEQHP WTHYLEQDIA EAIRNHFYQR GYPDVRVQMR RDARPAAEGV KPVTVIATIA
PGARVTIGHV RFEGLQKTVP AVVERRVRAT PGEPLNPLAL DQARFRLGRL GVFDRVDVRY
EPSEGPVRDP VFRVQEGREL EASLLLGYGS YEQLRGGIEL RQFNLFGRAH QSRLLLVQSM
KSSRGEYSYT VPELFGESLD GTGRVFGLQR QETSFLRQEY GANFSVAAPV RWLGANATLG
YTFQSLRNQD NNLATRTADE QQVTAASVEL NLVRDRRDNP LRPRRGYRWF VQTETASHYL
GGTVDYQRLE FGGSWHRPWG RGRWVHLGLN HGAITTFGSQ NNDSDLPVNK RFFPGGDNSI
RGFREGEAAP RGADGRFIGA KTYLLLNAEI EQALTAKWSL VVFGDALGMA VRLADYPFAE
QLFAVGVGVR YQTLIGPLRM EYGRNLDPRP RDPGGTLLFS VGFPF
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