| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3480 |
|---|
| Symbol | |
|---|
| ID | 6207799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 4526306 |
|---|
| End bp | 4527331 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641693146 |
|---|
| Product | ketol-acid reductoisomerase |
|---|
| Protein accession | YP_001820357 |
|---|
| Protein GI | 182415291 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0059] Ketol-acid reductoisomerase |
|---|
| TIGRFAM ID | [TIGR00465] ketol-acid reductoisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.161207 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCAA AAGTCTACAC CGACAACGAC GCCGATCTCG GCGTGTTCAA GAACAAGACC
CTGGCCGTGC TCGGCTACGG TTCGCAAGGC CACGCCCACG CGCTGAACCT GAAGGACAGC
GGCTGCAAGG TCATCATCGG CCTGTATCCC GGCTCGAAGT CGCGGTCGGT CGCGGAGCAG
CATGGCTTCG AAGTCGTGGA CACGGCCGAA GCGGTGCGCC GTGCGGACGT CATCATGGTC
GGCGTGCCGG ACATGCGGCA GGCCGACATC TACGAGCAGG ACATCGCGCC GAATCTCACG
AAGGGCAAAA CGCTGCTGTT CTCGCACGGG CTCGCGGTCC ATTTCGGGCT GATCAAGCTG
CCGGCGGACG TTGACTGCAT CATGGTCGCG CCGAAGGGCC CGGGCCATAT GGTGCGCCGG
CTTTACGTCG AGGGGAAGGG CATGCCGGCA CTGATCGCGG TCGCGCAGGA CAAGTCGCGC
ACGGCGAAGA AGCAGGCGCT GGCGTGGGCG AAGGGCATCG GCTCGACGCG CGCGGGCGTG
CTGCAGACGA CGTTCAAGGA AGAGACCGAA ACCGATCTGT TCGGCGAGCA GGCGGTGCTG
TGCGGCGGCG CGAGTGCGCT GGTCCGTGCG GGTTTTGAGA CGCTCGTCGA AGCCGGCTAC
CAGCCGGAGA TGGCCTATTT TGAGTGCCTG CACGAGCTGA AGCTGATCTG CGACCTGATG
TATGAGTCGG GCATCGCGGG CATGCGTTTC TCGATTTCGG AGACCGCCAA GTATGGCGAC
ATCACCCGCG GCCCGCGCGT GGTGAACAAG CAGAGCAAGG CCGAGATGAA GAAGATCCTG
AAGGAGATTC AAACCGGCCA GTTCACCAAG GAATGGGTGA AGGAATACAA GGGCGGGCTG
AAGAACTACA AGAAGCTGCT CGCCGAAGGT GAAAAACACC CGATCGAGAA AACCGGTCAG
CGGCTGCGCG CGATGATGCC TTGGATGACC AAGAAGAACA TCAAGGGCGC GCAGGCGGCG
TACTGA
|
|---|
| Protein sequence | MPAKVYTDND ADLGVFKNKT LAVLGYGSQG HAHALNLKDS GCKVIIGLYP GSKSRSVAEQ
HGFEVVDTAE AVRRADVIMV GVPDMRQADI YEQDIAPNLT KGKTLLFSHG LAVHFGLIKL
PADVDCIMVA PKGPGHMVRR LYVEGKGMPA LIAVAQDKSR TAKKQALAWA KGIGSTRAGV
LQTTFKEETE TDLFGEQAVL CGGASALVRA GFETLVEAGY QPEMAYFECL HELKLICDLM
YESGIAGMRF SISETAKYGD ITRGPRVVNK QSKAEMKKIL KEIQTGQFTK EWVKEYKGGL
KNYKKLLAEG EKHPIEKTGQ RLRAMMPWMT KKNIKGAQAA Y
|
|---|
| |