Gene Oter_3416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3416 
Symbol 
ID6204358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4451263 
End bp4452828 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content64% 
IMG OID641693081 
Producthypothetical protein 
Protein accessionYP_001820293 
Protein GI182415227 
COG category[R] General function prediction only 
COG ID[COG4373] Mu-like prophage FluMu protein gp28 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.940331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAAGG CTGCGAAGAA ACTCGCCAAG GCGGCCGTCG CCGTCGCTGC GATCGCAGTC 
GCGACCGGCG GCATGGTCCC CACGCTGCTG CACTATCGCG GCTACCAGCT GCCGGTCATT
CATGACCACA CGACCAAGAC GGCGATCCTC CACTGGTCGC GGCAAATCGG CAAGAGCACG
ACGCTCGCCG GCTGGGCGGT CGATCGGTTG CTCAAACAGC TTCAGACCCA CGACACCTGG
CTAGTCACGG TGCTCAGCAA CTCGCGCGCG AATGGTGGCG AGTTCGTGCT GAAGGTGCAC
GAGGTGTGCC GTAAACTCGG GCAGGCGTTC GTCGAGGACG GAAACCGCGA AGCACTCGCC
GACGACAAAA CAATGTCCGA GGACGCGAAG CTCGAGCTGA TGCGGTTCGA GGTGCGGCTG
CAGGTCGGTC AAAAGCTGGG GCGCATCATC GTGCTAGCCG CGAATCCGCG CACCGCGCGC
GGTTTTTCGG GCGATCTGAT TCTCGACGAG TTCGCGTTCC ACCAGGACTC CAGAGCGATC
TGGGAAGCCG CCGAGCCGAT CATCTCCGCG AACCCCGAGT TCCTGTGCCG GATTTCGAGC
ACGGGCAATG GCCGACGAAA CATGTTCTAC CAGTTGATCG CCGAGGGGCG TATCCCGTAT
TATCGGATGC GCCGCAGCGA TGCCTGGAAG CGTGGCGAGA TCCGCATCTA CTCGGTCGTT
ACGGGCGAGG AGATCACGCC CGACCAGGCG CGGGCCGAAG CCTCGGACAA ACGTGCTTAC
GACCAAAACT ACGAAGGCGA GTTCAATGAC GAGGCGAGCG CGTTGCTCAC CCAGGAATTG
ATCAGCGCAG CGGAGCGCGA GGGCATCGCC ATCGAGCACC AGGAATGGAG CGAGGCCACG
ATCGAGCGGC TGCGCACGAA GACTATTGGC GATCTCTTCC TTGGCCAGGA CGTCGGCCGC
AAGCGCGACT TCTCCGTGCA GACCGTGATC GAGCGGATCG GCAGCGGCTA TCGCGTGGTC
GCCATGCTGC GCATGGAAAA CATGCGCCTG CCCGCGCAGC AGCGCGAGCT CGAGAAGATC
TGCAAGTTGC CGAAGTTCCG CTCGGCCGAG ATCGACATGA CCGGCCTTGG GCTAGGACTC
GTCGAGTATG CCCAAGAGGA GCCGTGGGGT GGCAACGTGC GGGGTGTGAA TTTTGGGTCG
AGCGAGCCGA TCAGCCTCAA GCTGCGCGCC GATGGTAAAA AGGGCGAGAC CGCGCCGGTC
ACCGAACTGA TGGCGACCGA GCTGCTCGGC GTGTTCGAGG ACAAGCGCAT CGAGATCCCG
ATGGATCCCG AGCTGCGCGA CGATTTGCGG AAGCCCGAAA AGCTCGTGAG CCCGAGCGGA
CGCGTCTCAA TCGCTGCGGT GCGCGACGAA GCCGGGCACG CCGATCATTT CTGGTCGGTT
GCGCTCGCGG TGCGCGCGAG CGTGCGTGGC GGAGTCCCGT TCGCCTATTC GCCGGTGCGC
GGTGCGCACC GCGGCCGCGA CGGCATGCGC CGGCGGCTCC TGGACAAGAA GGCGGTGACC
CTGTGA
 
Protein sequence
MTKAAKKLAK AAVAVAAIAV ATGGMVPTLL HYRGYQLPVI HDHTTKTAIL HWSRQIGKST 
TLAGWAVDRL LKQLQTHDTW LVTVLSNSRA NGGEFVLKVH EVCRKLGQAF VEDGNREALA
DDKTMSEDAK LELMRFEVRL QVGQKLGRII VLAANPRTAR GFSGDLILDE FAFHQDSRAI
WEAAEPIISA NPEFLCRISS TGNGRRNMFY QLIAEGRIPY YRMRRSDAWK RGEIRIYSVV
TGEEITPDQA RAEASDKRAY DQNYEGEFND EASALLTQEL ISAAEREGIA IEHQEWSEAT
IERLRTKTIG DLFLGQDVGR KRDFSVQTVI ERIGSGYRVV AMLRMENMRL PAQQRELEKI
CKLPKFRSAE IDMTGLGLGL VEYAQEEPWG GNVRGVNFGS SEPISLKLRA DGKKGETAPV
TELMATELLG VFEDKRIEIP MDPELRDDLR KPEKLVSPSG RVSIAAVRDE AGHADHFWSV
ALAVRASVRG GVPFAYSPVR GAHRGRDGMR RRLLDKKAVT L