Gene Oter_3370 details

Gene Information

• Locus tag: Oter_3370
• ID: 6204452
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Opitutus terrae PB90-1
• Kingdom: Bacteria
• Replicon accession: NC_010571
• Strand: -
• Start bp: 4410420
• End bp: 4413860
• Gene Length: 3441 bp
• Protein Length: 1146 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 641693035
• Product: TPR repeat-containing protein
• Protein accession: YP_001820247
• Protein GI: 182415181

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.707224
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 0.946733
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCGCCTC CCATGAACGT CGACTCTGCC GTACAGGTCT CCTTCGCTGA CCTCGTCCTC 
CCGACCTACT TGCCGGACGC GCCGGACAAA AATCCGATTT TCTTCGAGGA CCGCGTCTAC 
CAGGGCAGCA GCGGCAATGT CTATCCGCTG CCCTACACCG ACCGCATCGC CGAAACGAAG 
ACGAACCACA CGTGGAAGGC GGTTTGGATC GAGAACGAGT TTCTCCGGGT GCTGGTGCTG 
CCCGAACTCG GCGGCCGCAT CCACGCCATT CAGGACAAGA CGAACGGCTG CGACCTCATT 
TATCACCAGC AGGTGATCAA GCCGGCGCTG ATTGGGCTGG CGGGGCCGTG GGTGAGCGGC 
GGCATCGAGT TCAATTGGCC GCAGCACCAC CGGCCGGCGA CGTTTCTGCC GACCGACATC 
GAGATCGAGA GGCACGCAGA CGGCGCGAGG ACCGTCTGGT GTTCGGATCA CGATCCGCTG 
GCGCGAATGA AAGGGATGCA CGGGGTGTGT CTGCGTCCGG GCATCGCGAC GGTCGAACTG 
CGGGTTCGCG CCTACAACCG GACGGCGCTG CCGCAGACGT TCCTCTGGTG GGCGAATGTC 
GCGGTGCGCG TGCATGAAAA CTACCAAAGC TTTTTCCCGC CGGACGTGAA CTCCGTCGCG 
GATCACGCGA AACGCGCGAC CAGCGCCTAT CCGCTCTGCA CCGGACGCTA CTACGGCGTG 
GACTATGGCG CGCGGGCAAA GTCCGGCGTG CCGGCGCGGG AACGGCCGTC GCGCTATGTG 
CCGTCGCATT GTGGCGGGAA AACGGCGGTC GACTACGCGC CGAACGATCT CTCGTTCTAC 
GCGAATATTC CCGTGCCGAC CTCTTACATG TGTCTCGGCA CGAAGGAGGA TTTTTTTGGC 
GGCTATGATC ATGCGACGGA GACCGGGCTG ATTCACGTCG CCAACCATCA CCTCGCGCCC 
GGCAAGAAAC AGTGGACGTG GGGCAATCAC GAGTTTGGCT ACGCGCGCGA CCGCAGCCTC 
ACGGACCCGA CGGCGGACGG CGAGTATCCG CCGTACATCG AATTGATGGC CGGCGTTTAC 
ACGGACAATC AGCCCGATTT CTCTTTCCTG CAGCCCGGCG AAACAAAGGT ATGGACCCAG 
TTCTGGTATC CGATCCAGCG CATCGGGCAG ACTCAGGCGG CGAATCACAC GGCCGCGGTA 
CACCTGAGCG TAGCCCGAGC GACGTGCCGC GTCGGGGTGG CGGTAACGAG GCGATTGTCG 
CGCGCGGTCG TGACGCTGAC CCTGGGAACC AAGCTCCTCG CCACGTTTAC GCGCGACCTC 
GCGCCGGGCG CGCCGCTGCT CGAGAACGTC GGACTGCCAC CCAAGCTCCG CACGCGATCG 
CTGCGGCTGG CGGTGCGCGA TGCCGAGGGG AATGAGGTGA TCAGCTACGC GCCCAAGCCG 
GCGATCGCGA CGAAGCCGCC GGCGCCCGCG GTCAAGCCGC CGCTGCCGCG CGATGTGAAG 
TCGGCCGACG AGCTTTGGTT GATCGGGGTG CATCTCGAGC AATACCGGCA CGCGACGCGC 
TGCCCCTCGC TCTACTGGCG CGAGGCGCTG CGGCGCGATC CGCTCGACAT TCGCTGCAAT 
CACGCCCTCG GCGGGTGGCA CCTGCGGCGC GGCGAGCTCG CGCTCGCGGA GATCCATCTT 
CGACGCGCCA TCGAACGCTT GACGTCGCGG AATCCGAATC CGCCAGACGG CGAGCCTTAC 
TATCATCTCG GGCTCTGCCT TGTTCACCAA GCGGACGCGC TGCCGCCGGA TGCGCGAGAT 
GAACGGGACG GCAAGCTGGA GGAAGCTTGC GCGGCCTTCT ACAAGTCGAC CTGGAATCAG 
GCGTGCGCGG CCGCGGGGTT TCATGCGCTG GCCGAACTCG ATTGCCGGCG CGCGGACTGG 
GGCAAAGCCT GCGAACACCT CGAGCAGGCA TTGCGCTGGA ACTCGGATAA TCTGCGGGCG 
CGCGATTTGA AAACGATCGT GCTGCGGCGG CTCGACCGCG CGGCGGAGGC GACGGCGGTG 
CTCGACGAGA CGCTCAAGCT GGATCCGCTG GACTGGTGGG CGCGGTGGCT GCGCGGCGAC 
CCTTTGACGT GTGACGCGCA AACCCGGCTG GATCTGGCGC ACGATTGCGC GCGCGCCGGC 
TTGCTTGACG AAGCGATTGC GATCCTGGGC GCGCCGGAGC CGGACGCCGG CACGGTTTTG 
CCGACGCAGA GCTGGGGCGC GGGGCCGCTG ATTCACTATA CGCTCGGCTG GCTGCACGAA 
CGTCGCGGCG ATGCTGCGGC CGCGCGCCAG GCGCGCCAGC GCGCGATGGG CAAGACCGCG 
GATTATTGTT TCCCGGCGCG ACTGGAGGAA ATCGCGGTGC TCGAGGCAGC GAGCCGGGCG 
AACCAGCGGG ACGCGCGGGC ACGGTATTAT CTCGGTAATC TGCTCTACGC GCGTCGGCGC 
CACGACGAGG CCGTGGCGCT ATGGGAGACC TCGGCGCGAC TGGATCCCTC GTTCGCGATC 
GTGTGGCGCA ATCTCGGACT CGCGTATCAC AACGCGCTCG GTGCTCCCGC GAAGGCGCGT 
CAGGCCTACG CGCGGGCGCT CCAGCTCGCG CCCGACGATG CGCGAGTGCT GCTGGAGCGA 
GACCAGCTGG CGAAGCGGCA GGCCGAAGCG CCAGCGAGCC GACTGCGCGT GTTGGAGCGA 
CGGGGGGCGG TGGTGCGGCG CCGCGACGAT CTTTCGCTGG AATACTGCGC GCTGCTGAAT 
CAGGTCGGAC GGCACGAGGA GGCAAGGGCG TTGCTGGCCT CGCGCGCGTT TCAGACGTGG 
GAAGGCGCCG AAGGCCAGGC CGTGGCGCAG CACGTGCGCA CGCACCTGTC GCTCGGCCGC 
GCGGCCTTCG CATCGGGCGG TTTCGCAGAT GCGCGGCGCT GGTTTGAGAC GGCGCTGACG 
GTGCCGGAGA ACCTCGGGGA AGGCCGGCAC CTGTTCATCA ACCAGAGTGA CGTCCACTAC 
TGGCTGGGCT GCGCGCACGC GGCACTCGGA GACACGCGCG CCGCGCGAGC GGAGTGGCGC 
GAAGCAGCGA GCTACACGGG CGATTTTCAG GCGATGAGCG TGCAGACCTA CTCGGAGCTC 
ACGGTGTATG CTGCGCTCGC TCAGCGCAGA CTCGGGCAAA AGGCGAGGGC GCGAAAACTC 
CTCCGCGCGC TGCTGTGCTA TGCGCAGGAA CTGGCGAAGA CCCCCGGCGG TATCGGATTT 
TTCGCCACAT CGATGCCGAC CGATGTGCTG CGCGAGGACG CCGCAGCGCG ACGGGAGCTG 
CACGCGCTCT GCCTGGAAGC GTCGGCGCGC CTCGCGTTGG GCCAGCACAG CCGTGGTATC 
GGCTTGCTCC GTCGCGTGCT CCGTCGCGAT CCCAGTCACG CGGCCGCGAT GGATCTGTTG 
CGCAGCGGCG ACCTGAAGTG A 

 

Protein sequence

MPPPMNVDSA VQVSFADLVL PTYLPDAPDK NPIFFEDRVY QGSSGNVYPL PYTDRIAETK 
TNHTWKAVWI ENEFLRVLVL PELGGRIHAI QDKTNGCDLI YHQQVIKPAL IGLAGPWVSG 
GIEFNWPQHH RPATFLPTDI EIERHADGAR TVWCSDHDPL ARMKGMHGVC LRPGIATVEL 
RVRAYNRTAL PQTFLWWANV AVRVHENYQS FFPPDVNSVA DHAKRATSAY PLCTGRYYGV 
DYGARAKSGV PARERPSRYV PSHCGGKTAV DYAPNDLSFY ANIPVPTSYM CLGTKEDFFG 
GYDHATETGL IHVANHHLAP GKKQWTWGNH EFGYARDRSL TDPTADGEYP PYIELMAGVY 
TDNQPDFSFL QPGETKVWTQ FWYPIQRIGQ TQAANHTAAV HLSVARATCR VGVAVTRRLS 
RAVVTLTLGT KLLATFTRDL APGAPLLENV GLPPKLRTRS LRLAVRDAEG NEVISYAPKP 
AIATKPPAPA VKPPLPRDVK SADELWLIGV HLEQYRHATR CPSLYWREAL RRDPLDIRCN 
HALGGWHLRR GELALAEIHL RRAIERLTSR NPNPPDGEPY YHLGLCLVHQ ADALPPDARD 
ERDGKLEEAC AAFYKSTWNQ ACAAAGFHAL AELDCRRADW GKACEHLEQA LRWNSDNLRA 
RDLKTIVLRR LDRAAEATAV LDETLKLDPL DWWARWLRGD PLTCDAQTRL DLAHDCARAG 
LLDEAIAILG APEPDAGTVL PTQSWGAGPL IHYTLGWLHE RRGDAAAARQ ARQRAMGKTA 
DYCFPARLEE IAVLEAASRA NQRDARARYY LGNLLYARRR HDEAVALWET SARLDPSFAI 
VWRNLGLAYH NALGAPAKAR QAYARALQLA PDDARVLLER DQLAKRQAEA PASRLRVLER 
RGAVVRRRDD LSLEYCALLN QVGRHEEARA LLASRAFQTW EGAEGQAVAQ HVRTHLSLGR 
AAFASGGFAD ARRWFETALT VPENLGEGRH LFINQSDVHY WLGCAHAALG DTRAARAEWR 
EAASYTGDFQ AMSVQTYSEL TVYAALAQRR LGQKARARKL LRALLCYAQE LAKTPGGIGF 
FATSMPTDVL REDAAARREL HALCLEASAR LALGQHSRGI GLLRRVLRRD PSHAAAMDLL 
RSGDLK