| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3355 |
|---|
| Symbol | |
|---|
| ID | 6206616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 4386017 |
|---|
| End bp | 4387210 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641693020 |
|---|
| Product | phosphate-selective porin O and P |
|---|
| Protein accession | YP_001820232 |
|---|
| Protein GI | 182415166 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3746] Phosphate-selective porin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.277566 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACTCTT CTGCGAACTC TCCCGCGTTT CGCGTGCGCC CGGCAGCACG GGCAGCGCTG
CTGGCCACGG CCGTTATCAC CCTGGGCCTT GCCGCTCCCG CGCTCGCGGG CGCGACTCCC
GATGAGCTGG AAACGCGGCT TCGTGCGCTC GAGTCCAAGG TCGCGACGCT TACCGAGGAG
AATGCGACAC TGAAACAGCG ACTCGGCGCC AGTGCACCCG CGAAATCCGG GCCGGCCGCG
GTCGTGCCGA TGGGCAAGGA GGCGAAGCTC GCGATCGGTG GTTTTCTGCA TTTGCAGGGT
GAGTGGGGCG ATGCCCCAGA CGCTCGATTT CCCGTCGGCG ACCGGTTCCT GGTGCGTCGC
GCGCGCCTCG GAGTCAAGGG CAGCTTCGTC GAGGGATTTG ACTTCGCCCT GACGTCCGAT
TTCGGCAGCA ACTCCCTCGG CACCGTCAGC GGCTATCGCG CCCAGATTAC CGACGCTTAT
GTGGCGTGGA GCCGTTTTCC GGCAGCGACC GTGACGGTCG GCCAGTTCAA GACGCCCTTC
GGCTACGAGC AGCTGATGTC CGGCACGAAG CACATCGTGA TCGAACGAGC GCTGGTGAAC
GACCAGCTCA CGTTGCGGCG CCAGATCGGC GCGATGCTGA GCGGTTCCGT CGGCGGTCCG
CGCCTGACCT ATGCAGCGGG GCTGTTCAAC GGCAACGGCT CCAACAACAG TGCCAACGAC
AATGACCAGT TCACCTACGT TGGGCGCGTC GCCGGAACCT GGATCCAGAC CGACGCGGGC
CGCGTGTCCA CCGGCATCAA TGCATTCACC GGGCGGGACT CCGGCAGCTT CAGCGGCCAC
CGTCGGGGCT TGGGCGTCGA TCTGCAGGCC TCGTATCGGC GACTCGAACT TCAGGCGGAG
TATCTCAATA CCTGCTTCGA TCGCGCGATC GGCCGGGACT ACACCGCGGA GGGATGGTCG
CTGCTCGGGA GTTGTGTGAT CATTCCCAAG CTGCTGCAGG GAGTGCTGCG CTATGAGGTG
TACGACGTCG ATCGTGATCT GGCCGGCGAC ACGACCGAGC TTTGGACGGT GGGCTTCAAC
TATCTGATCA AAGGCGATGA TCTGAAGCTG TCCTTCAACT ACCTGCTTGG CGATTTGCCG
GGACCCCGCG CCGAGGAAGG CCGACTCATC TCGCGCCTAC AGGTCGTCTT CTGA
|
|---|
| Protein sequence | MHSSANSPAF RVRPAARAAL LATAVITLGL AAPALAGATP DELETRLRAL ESKVATLTEE
NATLKQRLGA SAPAKSGPAA VVPMGKEAKL AIGGFLHLQG EWGDAPDARF PVGDRFLVRR
ARLGVKGSFV EGFDFALTSD FGSNSLGTVS GYRAQITDAY VAWSRFPAAT VTVGQFKTPF
GYEQLMSGTK HIVIERALVN DQLTLRRQIG AMLSGSVGGP RLTYAAGLFN GNGSNNSAND
NDQFTYVGRV AGTWIQTDAG RVSTGINAFT GRDSGSFSGH RRGLGVDLQA SYRRLELQAE
YLNTCFDRAI GRDYTAEGWS LLGSCVIIPK LLQGVLRYEV YDVDRDLAGD TTELWTVGFN
YLIKGDDLKL SFNYLLGDLP GPRAEEGRLI SRLQVVF
|
|---|
| |