Gene Oter_3346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3346 
Symbol 
ID6208809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4372367 
End bp4372780 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content67% 
IMG OID641693011 
ProductDGPFAETKE family protein 
Protein accessionYP_001820223 
Protein GI182415157 
COG category[S] Function unknown 
COG ID[COG3795] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.119641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.552539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTCG CCCCTTCGAC TTCCTACCTC CTGCTGTTCC GCAACACCGG CCCGGAGATC 
TTCGCGAAGC TCTCCGCCGA GCAGAAGCAG CAACTCGTGA CCCGCTGGAA CGCATGGTAT
GACGAGCTTG CGCAACGCGG ACAGGCCCTC GAGGGACAAC CGCTCGAGCC CGAGACGCGC
GTCGTCAGCG GGCCGGCTGG TCAGCGGGTG ATGGACGGGC CGTTCGCCGA GGCGAAGGAG
GCGGTCGGCG GCTACGTGAA GTTGTGCGTC AGCGGGCTCG ACGAGGCCAC GGCCATCGCG
CGCCGCCATC CTGCACTGGA GCACGGGCTC GTCATCGAAA TCCGGGAACT GACCGAGCAC
TGCCATCTCG GCGTCAAGAG CCGACAACCA TCCGCGGCGG CCGCGATGGC TTGA
 
Protein sequence
MDLAPSTSYL LLFRNTGPEI FAKLSAEQKQ QLVTRWNAWY DELAQRGQAL EGQPLEPETR 
VVSGPAGQRV MDGPFAEAKE AVGGYVKLCV SGLDEATAIA RRHPALEHGL VIEIRELTEH
CHLGVKSRQP SAAAAMA