| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3328 |
|---|
| Symbol | |
|---|
| ID | 6208566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 4352422 |
|---|
| End bp | 4353384 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641692995 |
|---|
| Product | DNA polymerase III gamma/tau subunits-like protein |
|---|
| Protein accession | YP_001820207 |
|---|
| Protein GI | 182415141 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.709055 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCATT CCCCCTGGCC GCCGACGCTC TTAGGCACGC CCACCGTGGC GGTGATCGAG
CGCGCGATCG AGCGCCAGCG GCTGTCGCAC AGCCTGCTGC TGCACGGCGA CGACTTCGAC
ACGCTGCTGC GCGTCGCGCA CGCGATCACG GACCGGTTGC TCACGCCGGA CCCGACCGGA
AGCGCGCACC ATTTCCCGCC GGAGCAGCAT CCCGACTGCC ACGCGCTGCG GCCCGCCGGC
AAGATGCGGC AGATTTCCGC CGAAGCCACG CGCAACCTCA TCAGCCAGGT GCAGGTCTCC
GCCACGGTGT CCAAGCGCAA GGTCGCGATC ATCCATGAAG CCGATCGGAT GAACGTCCCC
GCGGCCAACG TCTTTCTCAA AACGCTCGAA GAGCCGCCGG CCAACACGAC GCTGCTCCTG
TTGACAACCC GGCCGTACGC GCTGCTGCCG ACGATCCGCA GCCGCGTGCT GCATTTTCGT
TTTCCCAGCG CCACGACCGC GCTCGCCGCC GACGGATGGA CGCCCTGGCT CGACGACTAC
CGCGCGTGGC TGAGCCGGCT CGTCGAGGGC ACCACGCACA AGTCCACGGT CGCCGATCAT
CTTTTCACCG TCTACGGCCT CGTCGCGCGG TTCAGTGCGG TGCTGGACGC CGCCACCGAG
GTCGTCTGGA AACAGGAGAA GGAAAAACTT CCGGCCGAAC TGGACGACGA CGAGCAGGTC
GCGATCGAGA CGGGCATCGC GAACGGGCTG CGCGCGCGGT TGTTCACGGA AATCGAGCAA
GCCACGCGCA CCTTCGCGCT GCCGCGACTC GAAGCGGCCA CGGCGGAGCC GACGCGCCGC
GCGTTGGTCG CGGCGGTCGC CCAACTGGAG CACGACGTCG GTCTGCTGCG CCTCAATCTG
AACGAAGCCA CCGCACTTGA GCACTTCCTG CTCTCCTCGC TCCGGATCTG GTCCAGGCGG
TGA
|
|---|
| Protein sequence | MPHSPWPPTL LGTPTVAVIE RAIERQRLSH SLLLHGDDFD TLLRVAHAIT DRLLTPDPTG
SAHHFPPEQH PDCHALRPAG KMRQISAEAT RNLISQVQVS ATVSKRKVAI IHEADRMNVP
AANVFLKTLE EPPANTTLLL LTTRPYALLP TIRSRVLHFR FPSATTALAA DGWTPWLDDY
RAWLSRLVEG TTHKSTVADH LFTVYGLVAR FSAVLDAATE VVWKQEKEKL PAELDDDEQV
AIETGIANGL RARLFTEIEQ ATRTFALPRL EAATAEPTRR ALVAAVAQLE HDVGLLRLNL
NEATALEHFL LSSLRIWSRR
|
|---|
| |