Gene Oter_3324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3324 
Symbol 
ID6204857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4349211 
End bp4349639 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content62% 
IMG OID641692991 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_001820203 
Protein GI182415137 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.880505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.62653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGAA ATTTCCGACG ACAGCGCACG GCGCATCCGA TCGCCGATCT CAACGTCACG 
AACCTGATCG ACCTCGGGTT CATGCTGCTG ATCATCTTCA TGATTGCGAC GCCGCTGATG
CAGCAGGAGC AGTCGATCGC GGTGAACCTC CCGGCGGAGT CCAAGCGCGC GCAGGAGAAG
CCGGACAAGG AGCAGACCTT TCAAGCGATC GCGATCGATC GGCGCGGCAA CTATTTCTTC
GGCTCGACGC GCGTGGCCTT TGAGGAACTC GCCCCGCGGC TGGCGGAGCT GGCGCGGCGG
CCGAAGCCGC CGGTGATCCG GATTCGCGCG GACCTGACGC TGCAGTGGCA GCAGGTCGTG
CGCTTGATGG ACGAGATCAA GAAACACGAG TTGACCAAAA TCACGTTCGA TACCCAGACG
GCGGATTGA
 
Protein sequence
MARNFRRQRT AHPIADLNVT NLIDLGFMLL IIFMIATPLM QQEQSIAVNL PAESKRAQEK 
PDKEQTFQAI AIDRRGNYFF GSTRVAFEEL APRLAELARR PKPPVIRIRA DLTLQWQQVV
RLMDEIKKHE LTKITFDTQT AD