| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3284 |
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| Symbol | |
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| ID | 6207339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4300778 |
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| End bp | 4302532 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641692950 |
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| Product | transcriptional regulator, CadC |
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| Protein accession | YP_001820163 |
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| Protein GI | 182415097 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.58115 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTTTC GTTTCGGCCG ATTCGAGCTC GATGAAGCCC GGCGTGAGCT GCGGCTCGGA
CCGCGCCGGC TGGAACTGCA GCCGCGCACC TTCGACCTGC TCGTGTATCT TGTGCGGCAT
CACGAGCGGG TCGTGTCCAA GGACGAGTTG CTCCAGGCGC TGTGGCCGGG CGTCATCGTC
ACCGACTCCT CGGTGATGCG AGCGATGAGC CTGGTGCGGT CGGCGCTGCG CGCAGGCGGC
GCGGCCAACC TGATCGATAC GTTCTCGCGC CAGGGCTACC GCTTCACCGG AGAACTGCTG
GACGGCGTCC CGGCTCCGCG CCGGAACCAG CATTTGGCAC GGGCCCAGGC GGCCTGCGCG
CGCGGCCGGT GGGAGCAGGC GTTGCAGGCT TACCGTCGCG CGCACGACGA CCGCGGACTG
CCGGCGGCCG ATTTCGAACA GTGGGCGCAG GCCGCGTTGT GCGTGGGCCA GCCCGACGCC
GCCGTCGCGC CGCTCGAGCG GGCCGTGGCG GCGTATATCC AGAATGCGGA TCGGGCGGGT
GCGGCCCGGG CCGCGCTGAC GCTGGCCAAC GTGCACCTTG AGGCGCGCGC GCCCGCCGTG
GCCAAGGGCT GGCATCGACG CGCCGGCGGC TTTCTCCGCG ATGAGCCCAG CGAGACGCGG
GAGCACGGGC TGCATGCCTG GCTGACCGCG CGGATCGCCC TGTTCGAGGG CGAGCTCGCG
GAAGCGCTCC GCTGCGCCGA ACGGGCCGAA GCGCTCGCGC GACGCGTCGG CGATGCCGAT
GTCGAGGTGC TGGGACTCGT TTACCGCGGA TATATCGAGC TGGCCACCGG TCAGATCCGC
GCCGGTTTGG TGTGTCTGGA CGAGGCCGGC GCCGCCATCC TGGCGGGCAC GGTGGGGCCC
TGGGCCTCCG GCATCGTCTT CTGCTGCATC ATCTGGGCAA ATCTGGATCG CGGCGACCTC
AGCCGCGCGG CGCAGTGGAG CGAACAGTTC ACGCGCTGGG TCCAGCGGCA CACCGGTTAC
GGCGCGCCCG GGCTCTGCCG GCTGCACCAC GGCGAAGTGT TGTGCAACCA GGGCCGGCTT
GCCGCTGCGG AAGCCGAGAT CCGGCGCGCG CGAACGCTGC TCGCCGCGAG CGCGCGTTAC
GCCGAGGGCG ACGCTTGCCG CGTGCTCGGG GAGATCCGAC TGCTGCGCGG CGATCTCGCC
GGGGCCGAGG AGGCGTTTCG CCAAGCGCAC GAGCTCGGCT GGCATCCGCT GCCCGGCTGG
GCGCTGCTGC AGGCGGAAAA AGGTCAGCTG GCGGCGGCGA TCCAATCCCT GCAACGCGGC
CTCCGTTCAC CTGGTTGGGC GGAGGGGCAG CGTCGCGGCA TCCTGCTGGC GCATCTGGTC
CGGCTCGCCG CGCGCGCGGG TAACCGGACG CTGGCGCGGA AAACGTTGTA CCAGCTCGAA
CGGTCCACCG AGCTCCGGAG CCCCGTCGGT TCCCAGGCCC TGTTTCGTCG CGCGCGAGCC
GCACTGGCCG CCGTCGAGGG GCGCCGCGCC GCGGCTATCG AGGATCTGCG GGCGGCGCTC
GCGCTCTGGC TCGGCGCCGA ATCGGCGATC AACGCGGCTC ACACCCGGCT GGAACTCGCC
GAGTTGCTCG CCCGCGGCGG CGACCACGAT GAAGCCGGGT TGGAACTCGC CGCGGCCCGG
AAGGCGTTCA AGCAAATGGA TGCGCCGGCG ATGGTCGCCC GCTGCGCCGC GGCGCGCCAA
GCGCCGCGCG CGTAA
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| Protein sequence | MIFRFGRFEL DEARRELRLG PRRLELQPRT FDLLVYLVRH HERVVSKDEL LQALWPGVIV
TDSSVMRAMS LVRSALRAGG AANLIDTFSR QGYRFTGELL DGVPAPRRNQ HLARAQAACA
RGRWEQALQA YRRAHDDRGL PAADFEQWAQ AALCVGQPDA AVAPLERAVA AYIQNADRAG
AARAALTLAN VHLEARAPAV AKGWHRRAGG FLRDEPSETR EHGLHAWLTA RIALFEGELA
EALRCAERAE ALARRVGDAD VEVLGLVYRG YIELATGQIR AGLVCLDEAG AAILAGTVGP
WASGIVFCCI IWANLDRGDL SRAAQWSEQF TRWVQRHTGY GAPGLCRLHH GEVLCNQGRL
AAAEAEIRRA RTLLAASARY AEGDACRVLG EIRLLRGDLA GAEEAFRQAH ELGWHPLPGW
ALLQAEKGQL AAAIQSLQRG LRSPGWAEGQ RRGILLAHLV RLAARAGNRT LARKTLYQLE
RSTELRSPVG SQALFRRARA ALAAVEGRRA AAIEDLRAAL ALWLGAESAI NAAHTRLELA
ELLARGGDHD EAGLELAAAR KAFKQMDAPA MVARCAAARQ APRA
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