| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3237 |
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| Symbol | |
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| ID | 6204300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4236691 |
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| End bp | 4240278 |
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| Gene Length | 3588 bp |
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| Protein Length | 1195 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641692904 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001820117 |
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| Protein GI | 182415051 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.414155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCACGT CGCTTACCCG CGTCTTCAGC ACTCTTGTGT TCGTCGGTAT GGCCACGGCG
TTTGCCTGGC AGTCCGACAA TGGCGACGGC ACGTTTACCA ACCCGCCGCT CTACGCGGAC
TACCCCGATC CCGATATCAT CCGGGTGGGG GAAGATTTCT ATTTCGTCAC GACGACGTTC
GTAAACACCC CCGGGCTCAG AATCCTTCAT TCCCAGGACC TGGTGAATTG GGAAATCGTC
GCCCACGTGG TCCCGCGGCT CGACGGACGC GAGCAGTACG ACCTGACGAA CGGGACCGCG
TACCGCAATG GCGTGTTCGC TCCCAGCCTG CGATATCACA ACGGCACGTT CTACCTCGCG
GTGACACCGA ACGGACAGAA AACCCGGATC TATCACGCGT CTGATGTGCG CGGTCCGTGG
GAAGTGAACG AACTTGATCG CGCAGCCTTC GATCCTGCGC TCTTCATCGA ATCCGACGGC
ACGGGCTACA TCGTGACTTC GGGCGGCTGG GACGGCACGG GCACGTTGCT GACGCTGGAT
CCGACGTTTT CGCGCGTCGT CGCAGAGCAG CAGACCTTTT ATATTCGCGG CGCCGAGGGT
TCAAAGATCG TGAGACGCGG CGACTGGTAT TACCTCTTCA ACTCGATTCC ATCCCGTCTT
GGCCAGACAG TGTCGCGTTC GAAGAGCCTC TCCGGCCCGT GGGAAACCAG GAACCAACTC
GACGATACGA AGGGCGGACA TCAGGGCGCG ATCGTCGATC TGCCGGACGG CCGATGGTTT
GGCTTCATCA TGCGCGACTC CGGCTCGATC GGACGGATGA CGAACCTCAG CCCGATCTAC
TGGCAGGACG ACTGGCCCGT CTGGGGTTCG CCGACTGGCC CGGATCAGGT CCCGGCAGTC
GCCGAAAAGC CGGTGCAGGG CCAGCCGGTG CGGCAGCCCG CCACGAGCGA CGAGTTCGAC
TCCGCGGAGC TTGGCCTCCA GTGGGCGTGG AATCACAACC CCGACAATTC CCGCTGGTCA
TTGTCCGAGC GGCCCGGCTT CCTGCGGCTG AAGCCAACCC AGGCAACGGA ATTCTGGACA
GCGCGAAACA CGCTGACGCA GAAAGGGCAG GGGCCCTGGA GCAGGGGAGA AGTCAAACTG
GATCTCTCGC AACTCAAGTC TGGCGTCGTG TGCGGTTTCG GAACGCTGGG CAAGATCAAC
GGACACATCA GCGTGAGTCG CGGCGAGGAC GGCGGCGTGT ATCTCAGTTC GCAAGTCTAC
AATGACGGTG TCGGTAACGA GACGCGCGTC GCGCGTCAGC CGGTGGAGGC GACGGAGATT
TTCCTGCGCG CGGAGCTGGA CTTCCAACGC GACCGGGCCG TGTGCTCCTA CAGTCTCGAC
GGCGCCAGCT GGACCGCGCT CGGCGGCGAG TTCCCGCTCG CCTACGACTG GCGGACAGGA
ACCTTTCAAG GCGCGCAATT CGCGATCTTC TGCTACAGCC CGCAGGCGAG CGACGGCTTC
GTCGACGTCG ACTGGTTTCG ATTCACCGAC ACGCCGGCGC GCGCGGCAGA GTCGACGGCG
GCGAGCATCG CCGCGCTGGC GCCTTTCGCC TGGACCTCCA CCGGCCCGTT GATTTCGCCG
GTTTCCGACA CCACGCATTC GATCGTCGCC GTGAAGGATC CCACGATCGT GTACGGCAAC
GGCAAGTGGC ACGTGTATGC CACGACGGCG GACACCAGAG GCAACTGGAG CATGGCGTAT
TTCAACTTCC GCACGTGGGC CGAAGCGGCG AATGCGAAAC CTTACTACAT CGATCAGAAC
CCGAACCTTC GCGGCTATCA CTGTGCGCCC CAGGTCTTCT ATTTTCGTCC GCACAAAAAG
TGGTATCTCA TCTACCAGTC TCAGCACCCG ACCTATTCGA CGGCCGACGA CCTGGAGAAG
CCCGAAACCT GGACGGCGCC GCAGCCGTTC TTCAACGGCA CCCCGAAATC CGTCGTCCAG
GGCTGGATCG ATTACTGGAT CATTTGCGAC GAAACCCACG CCTACCTCTT CTTCTCTGAC
GATTGGGGGC GGTTCTACCG CAGTCGCACC AAGCTCGAGG ATTTCCCGCG CGGGTTCGAC
GAACCGGTGG TCATCATGCA GGACGCGAAT CGGTTCAACC TCTTCGAGGC CTCCTGCATT
TACCGCGTCA AGGGGACCAA CGAATATCTC TGTTTTATCG AGGCACTGGG TGGACCCAGC
GGCAAACGCT ACTTCCGCGG CTTCACCTCG AACCGATTGG ATGGCGAATG GAAGCCGCTG
GCGCAGGCCA ACTCTTGGGA GACGCCGTTT GCTGGCCCGG TGAACGTCAA TGCGGCCGAC
GGGGGCGCGC TCTGGTCAGT CGACATCAGC CACGGCGAGC TGCTGCGCGA CGGCAATGAC
GAGACGATGA CGATCGATCC TGACCATCTT TATTTCCTTT ACCAGGGGCG CGGGGACGCC
CCGGCCGGAA CCGAGTATTC GCAGCTGCCG TATCGGCTGG GGCTCCTGCA ATCCACCCGG
GCGAAACACT CGCCCGACAC GCCGCCCAGC CAGGTGCTGA ATGTCACGCG GCCGCAGGGC
GCGATCGTAC CGGTGGGTGG GAGCGTGACG TTTTCGGTGA CGGCGGAGAG TGCGGACGCG
GCGACCTTCA CCTATCAATG GCGGCGCAAC GGCGCCGACC TGCAGGGCGC GACCAGCCCA
GCGGTCACGA TCGAGAACGT CCAGCCGGAG AACGCCGGCT ACTACACCGT CCTGGTGTCG
CGTGGCAGCG CTTCCGTCCT CAGCGAGCCG GCGGTGCTTG AGCTGTCCTC GTCAGCCAAG
GTTGCCGGCG GCGCATCCGA AGTTGACGCC GACGTTCACC ATCAAAACGG CAATGTGTAC
GATCAGGTGC TGCTCAACGG TGCGTCGGCC GCGGCCATCG CCGATCCCGG GCAGATCCTC
CGCATGTCCT ACGTCGATCT CGATGACGAC ATCGTGCAGG TGGAGTTCTC GGGGGCAGGC
ACCGTGTCGC TCGTGCTCGA CGGCTATTCG GCTTCCGCGC CTCCGGCCAA GTACAACCAG
TCCGTCAGCT ATGTGAAAGG CAACGCGGGC ATCGTGATCA CCGGCGCCGA TGATTCGTCG
AACCTTTCCA TCTTCAGCGT CGGTCGGATC ACCGCGGTGA ATCAGGCGCT CTTTCGCGAC
GAGGTCAGCT ACGACGGCTT CGCTGATCTG GCGTATGTGG CGATCGCCAG CGCGAACGGA
CGGTTCGGCG GATTGCGCGC GGCGAATGCC GGGTTTCGCG CCACGGCCGG CCTGACCGGC
GTCTATGCGC CCGGGGTCGA GTTCGCCGGA CCCGTGTTTG TGAACGACAT CACTGCGTTC
GACGCGGCCA CGCCGGTGTT GCTCCTTGGC GCGGCCACGG ACGTGCGGAT TACCGGGGGA
GCACTGGCTC AGGACAACGG CCGCGCCGTG GCCGTTAGCG GTTTCGACCG GCTGCAGTTC
ACCAACGGCA GTAACTCGCA CGGAGCGATC GCCGCCGCGC AACCCTGTGG GGCACGTTTG
GAACGCTACG GCCTCGATGT CACCGCTCGT CTGGTCTCGC AACAGTAG
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| Protein sequence | MFTSLTRVFS TLVFVGMATA FAWQSDNGDG TFTNPPLYAD YPDPDIIRVG EDFYFVTTTF
VNTPGLRILH SQDLVNWEIV AHVVPRLDGR EQYDLTNGTA YRNGVFAPSL RYHNGTFYLA
VTPNGQKTRI YHASDVRGPW EVNELDRAAF DPALFIESDG TGYIVTSGGW DGTGTLLTLD
PTFSRVVAEQ QTFYIRGAEG SKIVRRGDWY YLFNSIPSRL GQTVSRSKSL SGPWETRNQL
DDTKGGHQGA IVDLPDGRWF GFIMRDSGSI GRMTNLSPIY WQDDWPVWGS PTGPDQVPAV
AEKPVQGQPV RQPATSDEFD SAELGLQWAW NHNPDNSRWS LSERPGFLRL KPTQATEFWT
ARNTLTQKGQ GPWSRGEVKL DLSQLKSGVV CGFGTLGKIN GHISVSRGED GGVYLSSQVY
NDGVGNETRV ARQPVEATEI FLRAELDFQR DRAVCSYSLD GASWTALGGE FPLAYDWRTG
TFQGAQFAIF CYSPQASDGF VDVDWFRFTD TPARAAESTA ASIAALAPFA WTSTGPLISP
VSDTTHSIVA VKDPTIVYGN GKWHVYATTA DTRGNWSMAY FNFRTWAEAA NAKPYYIDQN
PNLRGYHCAP QVFYFRPHKK WYLIYQSQHP TYSTADDLEK PETWTAPQPF FNGTPKSVVQ
GWIDYWIICD ETHAYLFFSD DWGRFYRSRT KLEDFPRGFD EPVVIMQDAN RFNLFEASCI
YRVKGTNEYL CFIEALGGPS GKRYFRGFTS NRLDGEWKPL AQANSWETPF AGPVNVNAAD
GGALWSVDIS HGELLRDGND ETMTIDPDHL YFLYQGRGDA PAGTEYSQLP YRLGLLQSTR
AKHSPDTPPS QVLNVTRPQG AIVPVGGSVT FSVTAESADA ATFTYQWRRN GADLQGATSP
AVTIENVQPE NAGYYTVLVS RGSASVLSEP AVLELSSSAK VAGGASEVDA DVHHQNGNVY
DQVLLNGASA AAIADPGQIL RMSYVDLDDD IVQVEFSGAG TVSLVLDGYS ASAPPAKYNQ
SVSYVKGNAG IVITGADDSS NLSIFSVGRI TAVNQALFRD EVSYDGFADL AYVAIASANG
RFGGLRAANA GFRATAGLTG VYAPGVEFAG PVFVNDITAF DAATPVLLLG AATDVRITGG
ALAQDNGRAV AVSGFDRLQF TNGSNSHGAI AAAQPCGARL ERYGLDVTAR LVSQQ
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