| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3234 |
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| Symbol | |
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| ID | 6204215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4229683 |
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| End bp | 4233348 |
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| Gene Length | 3666 bp |
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| Protein Length | 1221 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641692901 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_001820114 |
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| Protein GI | 182415048 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.763048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0174911 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAC GAAGAGCGAT CTATCATCTC AGGGCCGCCG GCACATTGCT GGTGGCGGTC
CTCGCCCCGG CGGGCGTCCT GGCGCAGACC ACGACGACTC CGCCCGCCCC GCAAGACGAG
GATGTCGTCC TCCTGTCCCC GTTCGAAGTC TCCGCCGAGC AACAAAGCAA CGGCTACGCC
ACGGCGACGA CCCTGGCCGG CAATCGCTTG AACACCGACC TGCGGGACCT CGGCACGGCT
CTCTCCGTCT ACAACGCCGA GTTCATGACG GATATCGGAG CCACGGATCA GCGGTCCCTG
CTCCAGTATA CGCTGGGGAC GGAGGTCGGT GGCGTGCTGG GCAATTACTC GGGATCCGGC
GGCGGCAACG CGCCGAATAC CAACGCGAGC TTGAGCCCGC AGTCGACGAA TCGTGTCCGG
GGACTGGTGA ACGCAGACAA TACGCGCGAT CTTTACCTGA CCAGCATCCC GTGGGACGGC
TACAACGTCG AGGCCGTGGA CATCCAGCGC GGCCCGAACG CCATCCTCTT CGGCCAAGGC
AGTGCGGGCG GCGTCATCAA CACGCGCACG AAGCAGGCGA GTTTCCGGAA TCTGGCTGAA
GCCGCTGTGC GCGTCGACCA ATACGGCAGT ATCCGCGGCA CGCTCGACAT CAACCGCGTG
CTCCTCCCGG AAGAGCTCTC GCTGCGCCTG GCACTCGTCC AGAACGAGGG CAAGTTTCAG
CAGAAGCCCG CGTTTGAAAA CTTCAACCGG CAGTTCGTCG CCTTCCGCTA CGAGCCGAAG
TTCCTGAAGA AGGCGGGGGC ACGCACCATC ATCAAGCTCG ACGGCGAGCT CGGCTCCTCG
ACCAGCAACC GGCCGCGCAA CATGCCGCCG CAGGATCGGA TCACGCCGTG GTTCAGCATC
GGCACGCCGG TCTACAACCT GGCCTGGTTA AACGAGGGCA ACTGGCAGAT CCCCGGTCGC
GGCGCTGCCG TGCGTCAGGA TTTCGCCACG CCGGCCAATC CGAATCCCAA CTTCCAGCCG
TTGCTCGGCG GTCAGGGTGC GGGCTATTCG GGCAATTACT TCGGCGGTTC GGTCTTCCAG
TATAACGGCG ACTCGTCGAC GCCGCTGTTC GCGATGGCCC TGAATCCGGT CACCTACTTG
GGCCTGGGCG CGAACGGCCA ACGCGACGGC AATATCGCGG GCCTGGCGCC GTCCGGACCG
CGCGGCATGC CGGGATATCG CGATTACGCC TTCGAAATGA AGCTGCCGTT CGCCTCGCTG
GCCAAGAACA AGTTCATCAC GGATACCAAC GTGTTCGATT TCTACAACAA CCTGCTCGAT
GGTGACATCA AGCGCGAGTG GTACGACTTC AACACCTTCG ACGCGTCGAT CAGCCAGACC
TTCTTCAACG ACCAGCTGGG TTTCGACATC GGTTACCACG ACGAGACCTA CAAGGATGGT
GGCTATAATC CGGTGAGCGA CACGATCTTC ATCGACGTGC AGGCGCGCTG GACGGATGGC
ACGAACACGC CGGAGAATGG CTGGTACTAC GACGGCACGC CGAACGTGGG CACGGGCCGG
CCGTTTGTTT CCGTTGGCAA CGGCGAGGGC CGCGGCCGCA TGGACCGGGA AAGCACGCGG
GCGACGGCGT TTGCTACGCA TGACTTCGCC AAGTCGGCCG ACAGCCACTG GCTGCTCCGC
ATCCTTGGCC AGCACACCGT GACCGGTATG GTGTCCCAGG ACGACACCTT CCGCACGACC
GAAAATTGGG TGAAGAGCAC CTTCGTCGGC GACTACTACA ACCATCCGCA GTTTGCCGAG
ATCAAGGACA ACAACGGCCG GTTCTGGGCC GATTTCGTGC CGCAGATGAA CGTCTACGTC
GGGCCCCAGC TGACCGGCAA GAGCCTCGGG CAGGACTTGG GCATCCGTGG CCCGTCGGCC
ACACCGATCA TTCCCAGCAC GGTAAACCTG CGCTACTTCG ACTCCACGTG GACGGCGACC
GGAGTCAACC CGGCCGATCC TTGGTACAAT CAAGTCACTG CCGGTCTGCC CCAAGGGCCT
GCGCTCTCGA CGCAATCGGA GAACCCGGCG AATTATCGTG GCTGGGGCAC CCGGTCGGTG
TCGCTGATGA CGGATGCGGA TCCCAACAAC ATTCCGGCGC TCATGTCGGA GCGGACGTGG
GACTCGCGGT TCAACGATGC CACCGCGCTC GTCTGGCAGG GCAAGTTCTG GGATGATGCG
ATCGTCGCGA CGGCGGGCAT GCGTCGCGAC AAGGTGGGTC AGACGTTCAC CCGTTGGAAT
CGCGAGGAAT CCACTGACGA TCCCACGCAG ATTCGCTCCA CGGTGAGCGT GCTCGGCCCG
GTCCAGGAGG ATTCCCGGAG CTGGGGTGTG GTCGCCCATT TCGACCAGCT GCCTTGGGTG
GGCCGGTGGA TGAAACGACT GCCGGTCAGC ATCAGCGCCA CGTATAACAA GTCCGAAAAC
TTCCAGACGG GCACGATCTA TCAGGACTAC TTCGGCCAGG AGCTGCCACT GCCGTCCGGT
GAAACCAAGG ACATGGGCGT CATTCTGGCG ACGCGCGATG GCAAATACGC CTTCAAGGTC
AACAAGTTCG AGTCGGCGGT GAAGAACAAC CCGTCGTCCG GGCTGCAGTT CTGGAACTAC
GGCAACAACG TGGGCATCTA CGCCCAAGCC TATCACCAGA TCAAATACAA CTACGTGAAC
CGCAGCCAGC CGAACAGCCA ACGCTATGGC GCCAACATCA TCAGCGATCT GCCGGTGCCA
GGACCGGCGG ATCCGCAGAC GAAGTGGAAC TTCGACTACC AGCCGCTGAA CGGCCAGACG
CTGGAGCAGG CGCAACAGCT CGAAGTCGCG GTGATCAACG CGTGGGATCA GTGGCTCACG
GAATTGGCTC CGCTCCCGCA GGTCATGGCG AAAGCCTGGA GCTTTGCGTG GGATGGCAGC
GACTTCACGG AGACGGCGCT GGCCAACTTC CGCTACACGG AAGACCTGCT GGCCGAGGGC
TACGAATTCG AGCTGCACGC CCAGGTGACC GACAACTGGC GGATGACGCT CAATGCGTCG
CGGATCAAAT CGTATCGTGA CAATCTGGGC AACACGCCGG TGCCGGGCGG CGGGATGACG
ATGACCGACT ATCTGGTCGA TTTCGACCGC CGGCTGAACG AGACGGCCAT GGGTGACCTC
CGCATTTGGG GCCCGGGCGG CTCGGCGAAC GCGCGCGACA ACTGGAATGG ATACGCCAAC
GGTGACCTGA AGGCCCGGCT GGCGGAACAG GGCACCGTCG TTCCCGAGAA TCGCCTCTGG
CACTTCAACC TGATCACGAA CTACGACTTC ACCGAGGGCC GTTTGAAGGG GTGGAGCGTC
GGTGGCGCGG TCAGGTATCA GTCGGCCATG ACCCTGGCCT ACAAGCCCAT CCAGCAGCCG
AAGTACATCG AGTACGATCT TAGCGCGCCG TACCGGGACA AGGCGCTCAC CGACTTCGAT
GTGTGGATCG GTTATCATCG GAAGCTCTTC CACGAGAAGA TCGATTGGCA CGCCCAGTTG
AACATCGCCA ACGTCGGCGT GGGCAACGAA CTGCTCCCGG TCACCGTGCA GCCCGACGGC
TCGCCGGCGG CCTATCGTAT CCGACCCCCG CAGCAAATAT TCCTGACGAA CACCTTCAGG
TTCTAG
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| Protein sequence | MTKRRAIYHL RAAGTLLVAV LAPAGVLAQT TTTPPAPQDE DVVLLSPFEV SAEQQSNGYA
TATTLAGNRL NTDLRDLGTA LSVYNAEFMT DIGATDQRSL LQYTLGTEVG GVLGNYSGSG
GGNAPNTNAS LSPQSTNRVR GLVNADNTRD LYLTSIPWDG YNVEAVDIQR GPNAILFGQG
SAGGVINTRT KQASFRNLAE AAVRVDQYGS IRGTLDINRV LLPEELSLRL ALVQNEGKFQ
QKPAFENFNR QFVAFRYEPK FLKKAGARTI IKLDGELGSS TSNRPRNMPP QDRITPWFSI
GTPVYNLAWL NEGNWQIPGR GAAVRQDFAT PANPNPNFQP LLGGQGAGYS GNYFGGSVFQ
YNGDSSTPLF AMALNPVTYL GLGANGQRDG NIAGLAPSGP RGMPGYRDYA FEMKLPFASL
AKNKFITDTN VFDFYNNLLD GDIKREWYDF NTFDASISQT FFNDQLGFDI GYHDETYKDG
GYNPVSDTIF IDVQARWTDG TNTPENGWYY DGTPNVGTGR PFVSVGNGEG RGRMDRESTR
ATAFATHDFA KSADSHWLLR ILGQHTVTGM VSQDDTFRTT ENWVKSTFVG DYYNHPQFAE
IKDNNGRFWA DFVPQMNVYV GPQLTGKSLG QDLGIRGPSA TPIIPSTVNL RYFDSTWTAT
GVNPADPWYN QVTAGLPQGP ALSTQSENPA NYRGWGTRSV SLMTDADPNN IPALMSERTW
DSRFNDATAL VWQGKFWDDA IVATAGMRRD KVGQTFTRWN REESTDDPTQ IRSTVSVLGP
VQEDSRSWGV VAHFDQLPWV GRWMKRLPVS ISATYNKSEN FQTGTIYQDY FGQELPLPSG
ETKDMGVILA TRDGKYAFKV NKFESAVKNN PSSGLQFWNY GNNVGIYAQA YHQIKYNYVN
RSQPNSQRYG ANIISDLPVP GPADPQTKWN FDYQPLNGQT LEQAQQLEVA VINAWDQWLT
ELAPLPQVMA KAWSFAWDGS DFTETALANF RYTEDLLAEG YEFELHAQVT DNWRMTLNAS
RIKSYRDNLG NTPVPGGGMT MTDYLVDFDR RLNETAMGDL RIWGPGGSAN ARDNWNGYAN
GDLKARLAEQ GTVVPENRLW HFNLITNYDF TEGRLKGWSV GGAVRYQSAM TLAYKPIQQP
KYIEYDLSAP YRDKALTDFD VWIGYHRKLF HEKIDWHAQL NIANVGVGNE LLPVTVQPDG
SPAAYRIRPP QQIFLTNTFR F
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