| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3220 |
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| Symbol | |
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| ID | 6204282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4203003 |
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| End bp | 4204610 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641692887 |
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| Product | Alpha-galactosidase |
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| Protein accession | YP_001820100 |
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| Protein GI | 182415034 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.528539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.253195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCT CCTCGCTCAA TAAATCCTTC TTCGTCGCCG CGCTCGCCTG CGCGGGGTTC
TTCCTCGCAG CAGTCGAGCC CCTGGCCGCA ACGACCCCGC AAATTCTCAC GCCGCCCGCG
CCAGCGACGC CGCGGATCAA CGGCGCGAGC GTGTTCGGCG TCCGGCCCGG CGCGCCGTTT
CTCTACGCCA TTCCCGCGAC CGGCCAGCGG CCGATGACGT TCGCCGTCGA TGGCCTGCCC
GACGGGCTCA CGCTGGATTC CGCCACCGGC CGGATCACCG GCGCGCTGGC AAAAGCCGGC
GAGCACCTCG TCACGCTGCG GGCAAAGAAC GCGCTCGGGG AAGCGGAGAG AAAATTCCGG
ATCGTCGTCG GCGACCGGAT CGCGCTCACG CCGCCGATGG GCTGGAGCAG CTGGAATTGC
TGGGGCGATG CCGTTAGTCA GGAGCTCGTG CTCAGCTCCG CTCGCGCGAT GGCGGAGAAA
GGCCTGCGCA ACCACGGCTG GACCTACATC AATATCGACG ACGGCTGGCA GGGGAAGCGC
GGCGGTGAGT TCAACGGTCT TCAGCCCAAC AAGAAGTTTC CCGACATGAA GGCGCTTGGC
GACGAGATCC ATGCGCTCGG GCTCAAGTTC GGCGTTTACT CGAGTCCGTG GCGCGGCACC
TATGCGGGCT ATCCTGGCGG ATCCTCGGAC AATGCGGATG GCACCTACGA ATGGGTGGAG
TCCGGCAACG TGAACGAGTT CTTCAAGCTC AACAAGGACC CGAACGCGGC CGACGCGAAA
CCCAACTGGG TCAACTGGAC GTTTGGCGCG CATTCCTTCG CCACGTCGGA TGCCCGACAG
TGGGCGCAGT GGGGCGTCGA TTACCTGAAA TACGATTGGT TTCCAAACGA CGTGCCACAC
GTCCAGGAGA TGACGGACGC CCTGCGCGCC ACCGGACGCG ACATCGTTTT CAGCCTCTCG
AACACCGGGC TCTACGACAG CGCTCCGGAC TACGTGCGGC TCGCTCAGCT CTGGCGCACA
ACCGGTGACA TTGTCGACAC CTGGGACAGC GTCAGCCGCA ACGGTTTCTC CCAGGACCGC
TGGGCCGCCT ACACCGGCCC CGGCCACTGG AGCGATCCTG ACATGCTCGT GCTCGGAAAG
GTCGGCTGGG GCCCGAACCT CCACCCGACG CGCCTGACGC CCGACGAACA GTATTCCCAC
ATGAGCCTGT GGTGTCTCCT CTCGGCGCCG CTCCTGCTCG GCTGCGACCT CGCGCAGATC
GACGACTTCA CGCTCAGCCT GCTCACCAAT GACGAGGTGC TCGCGATCAA CCAGGACGCA
CTCGGCAAGC AGGCCACGCA GTTCAGCAAC GTCGACGGCA AGGTCGTCTA CGCCAAGACG
CTCGAGGACG GCTCGTTCGC CGTCGGGCTG TTCAACCGCG GCGAGGCCGA GACCACCGTC
ACCGTAAAAT GGGGACCGTG GGGCAATCTC CCGACCCCGC ACGTCGGCAC GACCTTCCGC
GTGCGCGATC TCTGGCGGCA GCAGGACCGC GGCGACTTCA AGGACCAGTT CGAAACCAAG
GTCGCGCCGC ACGGGGTCGT CCTCGTCCGA CTGATCCCCA CCCCCTAG
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| Protein sequence | MKASSLNKSF FVAALACAGF FLAAVEPLAA TTPQILTPPA PATPRINGAS VFGVRPGAPF
LYAIPATGQR PMTFAVDGLP DGLTLDSATG RITGALAKAG EHLVTLRAKN ALGEAERKFR
IVVGDRIALT PPMGWSSWNC WGDAVSQELV LSSARAMAEK GLRNHGWTYI NIDDGWQGKR
GGEFNGLQPN KKFPDMKALG DEIHALGLKF GVYSSPWRGT YAGYPGGSSD NADGTYEWVE
SGNVNEFFKL NKDPNAADAK PNWVNWTFGA HSFATSDARQ WAQWGVDYLK YDWFPNDVPH
VQEMTDALRA TGRDIVFSLS NTGLYDSAPD YVRLAQLWRT TGDIVDTWDS VSRNGFSQDR
WAAYTGPGHW SDPDMLVLGK VGWGPNLHPT RLTPDEQYSH MSLWCLLSAP LLLGCDLAQI
DDFTLSLLTN DEVLAINQDA LGKQATQFSN VDGKVVYAKT LEDGSFAVGL FNRGEAETTV
TVKWGPWGNL PTPHVGTTFR VRDLWRQQDR GDFKDQFETK VAPHGVVLVR LIPTP
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