Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3220 |
Symbol | |
ID | 6204282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4203003 |
End bp | 4204610 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641692887 |
Product | Alpha-galactosidase |
Protein accession | YP_001820100 |
Protein GI | 182415034 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3345] Alpha-galactosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.528539 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.253195 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCCT CCTCGCTCAA TAAATCCTTC TTCGTCGCCG CGCTCGCCTG CGCGGGGTTC TTCCTCGCAG CAGTCGAGCC CCTGGCCGCA ACGACCCCGC AAATTCTCAC GCCGCCCGCG CCAGCGACGC CGCGGATCAA CGGCGCGAGC GTGTTCGGCG TCCGGCCCGG CGCGCCGTTT CTCTACGCCA TTCCCGCGAC CGGCCAGCGG CCGATGACGT TCGCCGTCGA TGGCCTGCCC GACGGGCTCA CGCTGGATTC CGCCACCGGC CGGATCACCG GCGCGCTGGC AAAAGCCGGC GAGCACCTCG TCACGCTGCG GGCAAAGAAC GCGCTCGGGG AAGCGGAGAG AAAATTCCGG ATCGTCGTCG GCGACCGGAT CGCGCTCACG CCGCCGATGG GCTGGAGCAG CTGGAATTGC TGGGGCGATG CCGTTAGTCA GGAGCTCGTG CTCAGCTCCG CTCGCGCGAT GGCGGAGAAA GGCCTGCGCA ACCACGGCTG GACCTACATC AATATCGACG ACGGCTGGCA GGGGAAGCGC GGCGGTGAGT TCAACGGTCT TCAGCCCAAC AAGAAGTTTC CCGACATGAA GGCGCTTGGC GACGAGATCC ATGCGCTCGG GCTCAAGTTC GGCGTTTACT CGAGTCCGTG GCGCGGCACC TATGCGGGCT ATCCTGGCGG ATCCTCGGAC AATGCGGATG GCACCTACGA ATGGGTGGAG TCCGGCAACG TGAACGAGTT CTTCAAGCTC AACAAGGACC CGAACGCGGC CGACGCGAAA CCCAACTGGG TCAACTGGAC GTTTGGCGCG CATTCCTTCG CCACGTCGGA TGCCCGACAG TGGGCGCAGT GGGGCGTCGA TTACCTGAAA TACGATTGGT TTCCAAACGA CGTGCCACAC GTCCAGGAGA TGACGGACGC CCTGCGCGCC ACCGGACGCG ACATCGTTTT CAGCCTCTCG AACACCGGGC TCTACGACAG CGCTCCGGAC TACGTGCGGC TCGCTCAGCT CTGGCGCACA ACCGGTGACA TTGTCGACAC CTGGGACAGC GTCAGCCGCA ACGGTTTCTC CCAGGACCGC TGGGCCGCCT ACACCGGCCC CGGCCACTGG AGCGATCCTG ACATGCTCGT GCTCGGAAAG GTCGGCTGGG GCCCGAACCT CCACCCGACG CGCCTGACGC CCGACGAACA GTATTCCCAC ATGAGCCTGT GGTGTCTCCT CTCGGCGCCG CTCCTGCTCG GCTGCGACCT CGCGCAGATC GACGACTTCA CGCTCAGCCT GCTCACCAAT GACGAGGTGC TCGCGATCAA CCAGGACGCA CTCGGCAAGC AGGCCACGCA GTTCAGCAAC GTCGACGGCA AGGTCGTCTA CGCCAAGACG CTCGAGGACG GCTCGTTCGC CGTCGGGCTG TTCAACCGCG GCGAGGCCGA GACCACCGTC ACCGTAAAAT GGGGACCGTG GGGCAATCTC CCGACCCCGC ACGTCGGCAC GACCTTCCGC GTGCGCGATC TCTGGCGGCA GCAGGACCGC GGCGACTTCA AGGACCAGTT CGAAACCAAG GTCGCGCCGC ACGGGGTCGT CCTCGTCCGA CTGATCCCCA CCCCCTAG
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Protein sequence | MKASSLNKSF FVAALACAGF FLAAVEPLAA TTPQILTPPA PATPRINGAS VFGVRPGAPF LYAIPATGQR PMTFAVDGLP DGLTLDSATG RITGALAKAG EHLVTLRAKN ALGEAERKFR IVVGDRIALT PPMGWSSWNC WGDAVSQELV LSSARAMAEK GLRNHGWTYI NIDDGWQGKR GGEFNGLQPN KKFPDMKALG DEIHALGLKF GVYSSPWRGT YAGYPGGSSD NADGTYEWVE SGNVNEFFKL NKDPNAADAK PNWVNWTFGA HSFATSDARQ WAQWGVDYLK YDWFPNDVPH VQEMTDALRA TGRDIVFSLS NTGLYDSAPD YVRLAQLWRT TGDIVDTWDS VSRNGFSQDR WAAYTGPGHW SDPDMLVLGK VGWGPNLHPT RLTPDEQYSH MSLWCLLSAP LLLGCDLAQI DDFTLSLLTN DEVLAINQDA LGKQATQFSN VDGKVVYAKT LEDGSFAVGL FNRGEAETTV TVKWGPWGNL PTPHVGTTFR VRDLWRQQDR GDFKDQFETK VAPHGVVLVR LIPTP
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