Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3189 |
Symbol | |
ID | 6207556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4147113 |
End bp | 4147715 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641692856 |
Product | Holliday junction DNA helicase RuvA |
Protein accession | YP_001820069 |
Protein GI | 182415003 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00764376 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCACCT CGATCCAAGG CACGCTCGTT TCCGCCACGC CGCTTCAGGC GATTGTCGAA GTCGCCGGGT TCGGTTACGA GGTCCACATT CCCGTGACCA CGGCGGAGCG GCTGCCCGCG GCCGGCGCCG CCGTGAAGCT CCACACGCTC GTGATTTATC GCGAGGACTC GCAGACGCTC TACGGTTTCG CGTCGCCGGC GGAACGCGAT TTCTTCCGGC TGATGATCGA GCACGTCACG GGGGTCGGCC CGAAGATGGC CCTGAGCATC ATGAGCCGGC TCGCGCTTCC CTCCCTGGAA AGCGCCATTC GCATGGGCGA CGTGGCGAGC CTCGCGAAAT GTCCGGGCAT CGGCAAGAAA ACCGCCGAGC GGCTGGTGGT CGAACTGCGC ACCAAGGTCG GTGCCACCGG CGCTGCGCCG GGTCTCGCGA CCCAACCGGC GGCGGCCGCC TCGCCGGGAG CGAGTGCACA CCGCGACGCC GTGGCGGCGC TCGTGGCGCT CGGTTATCGC TCCGCGGACG CCGACGAGGC CGTGCGCCGC GCCAGCCTCG CGCTGGGCGA GGCGGCCACA ACGGAATCGC TGATCAAGAA AGCGCTAAGC TGA
|
Protein sequence | MITSIQGTLV SATPLQAIVE VAGFGYEVHI PVTTAERLPA AGAAVKLHTL VIYREDSQTL YGFASPAERD FFRLMIEHVT GVGPKMALSI MSRLALPSLE SAIRMGDVAS LAKCPGIGKK TAERLVVELR TKVGATGAAP GLATQPAAAA SPGASAHRDA VAALVALGYR SADADEAVRR ASLALGEAAT TESLIKKALS
|
| |