Gene Oter_3175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3175 
Symbol 
ID6207691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4132300 
End bp4133478 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content65% 
IMG OID641692841 
ProductDNA-directed DNA polymerase 
Protein accessionYP_001820055 
Protein GI182414989 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCTGC CCACGATCGT CCACCTCGAT GCCGACGCGT TTTTCGTGTC GTGCGAGCTC 
GCGCTCAAAC CCGAGCTGCG AGGGACCAAG TGCGCCGTGG GCGGACGCGA GCGCGGGATC
ATTTCATCCG CGAGCTACGA AGCGCGGGCC TGCGGCGTCT ACACCCCGAT GCCGACCACC
CGCGCGCTCA AGGTCTGCCC CGACCTCATC ATGTTGCCAC ACACCGGCGG ACTCTACAGC
CGGGTGTCGC GGCAGATGTT TGAACTCTGC GAAACCCTGA CGCCACTCGT GCAGCGGAAC
TCGATCGATG AAGGCTACCT CGATCTCGGC CCGTGCGGAT TCAAAACATC CGCGGAGATC
GAACAGGCCG TGCACGGATT GCAGCACAAA ATCGAACAAC AGCTGCAGAT CACGGCTTCA
TTCGGCCTCG CGGTGAACAA GCTGGTCGCG CAGATCGCCT CGAAGCTGCG GAAACCAAAG
GGCTTCGTCG TCGTGCCGTC GGGCACGGAG GCCGAGTTCC TCGCGCCGCT GCCGATTGGC
AAGCTCCCGG GCGTCGGCCC GAAGACCGAG GAACGGTTGG TCGGCCGGCA TGGCATCAAG
CTCGTGCGTG ATCTGCTCGC CCGCGGCGAG GCGGAACTGG AAGCCATCTT CGGCGACGGC
TGGCGGGAGA TGCGCGATGG CGCGCTCGGC ATCGACGATC GGCCGGTGGA GACGGAGCAC
GAGGATGCGA AGAGCTACTC GCAGCAGGAG ACCTTCGACG AAGACATCGC GTCGTTCGCG
GAAATCGAGC GAGTCGTGAA GCGGATGATC GACGAACTGC TGCCCAAGAT TCGCGAGGAC
GGGAAGCGCG TGCGCACGAT GACGGTGAAG GTGCGGTATC CGGATTTCAG TCAGGAATCG
CATGGCCGCA GCCTGAGCGC CGGCACCGAC CTCGAGGCGC CGTTTTATCC GCTGGTCACG
CCGTTGCTGC GGCAAGCGTG GACGAAGAAG CGGCCGCTGC GACTGGTGAG CGTCCGCTTT
TCGGGCGTAG AGGACACGCC GGTGCAGCTG GAAATGTTTG CCCAAAATGA GGAAAAACGG
CGCCGACTCG CCGCCGTGCT CGACCACCTG AACCGCCGCG GCGGTGATGC GGTCGTCCAG
CACGGCCATC AGCTTGCCAA GCGCCCGCCG CCTCGCTAA
 
Protein sequence
MILPTIVHLD ADAFFVSCEL ALKPELRGTK CAVGGRERGI ISSASYEARA CGVYTPMPTT 
RALKVCPDLI MLPHTGGLYS RVSRQMFELC ETLTPLVQRN SIDEGYLDLG PCGFKTSAEI
EQAVHGLQHK IEQQLQITAS FGLAVNKLVA QIASKLRKPK GFVVVPSGTE AEFLAPLPIG
KLPGVGPKTE ERLVGRHGIK LVRDLLARGE AELEAIFGDG WREMRDGALG IDDRPVETEH
EDAKSYSQQE TFDEDIASFA EIERVVKRMI DELLPKIRED GKRVRTMTVK VRYPDFSQES
HGRSLSAGTD LEAPFYPLVT PLLRQAWTKK RPLRLVSVRF SGVEDTPVQL EMFAQNEEKR
RRLAAVLDHL NRRGGDAVVQ HGHQLAKRPP PR