Gene Oter_3171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3171 
Symbol 
ID6204246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4129097 
End bp4129639 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content67% 
IMG OID641692837 
Product17 kDa surface antigen 
Protein accessionYP_001820051 
Protein GI182414985 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.834604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.616267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGGC TTTCCCCAAA ACAACAGACG TTCACGCTTC TTTTCGCGGC GCTCAGTCTC 
ACCGCCGGCT GTGCCGGACC TACCAACAAC ACGCAGCGGG GCGCGGCAGG TGGTGCCGTC
TTGGGCGGCC TCGCCGGCGC CATCATCGGC AACAACCGCG GTAGCGGCAA CGCGGCGAGC
GGCGCGGCCA TCGGCGCCGC TGCCGGCGCG ATTGCAGGCG GCGCCATCGG GCATTCGAAG
GACAAACGCG AAGCGCAGGC GGCGAGCGGC TATCCCTCGG CCAGCAACAC GTCGTCCGTG
ACGAACATCA CCGTGACGGG CGCGCCGCCG ATGCCGCCGG CTTCCATCGT CGAGAACCAG
CCCCCGCGAC CAAACGCCTC GGCTGTGTGG GTGCCTGGCT ACTGGTCGTA TGAAAACGGG
ATGAGCTATG TGTGGGTGCC CGGCCGCTGG GAAATTCCGC CGCCCGGTAC GAACACATTC
CAGCCGCCCT ATTGGATGCA ACAGGGCAAC GGCAACGTCT ACGTCCGCGG CTCCTGGCGC
TGA
 
Protein sequence
MKRLSPKQQT FTLLFAALSL TAGCAGPTNN TQRGAAGGAV LGGLAGAIIG NNRGSGNAAS 
GAAIGAAAGA IAGGAIGHSK DKREAQAASG YPSASNTSSV TNITVTGAPP MPPASIVENQ
PPRPNASAVW VPGYWSYENG MSYVWVPGRW EIPPPGTNTF QPPYWMQQGN GNVYVRGSWR